KEGG T02178: RVBD

Mycobacterium tuberculosis H37Rv: RVBD_3062

Entry

RVBD_3062 CDS T02178

Definition

DNA ligase I

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mtv Mycobacterium tuberculosis H37Rv

Pathway

mtv03410	Base excision repair
mtv03420	Nucleotide excision repair
mtv03430	Mismatch repair
mtv03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mtv03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mtv03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mtv03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mtv03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

397674988

NCBI-GeneID:

13317866

UniProt:

P95096 I6YB16

Position

3425581..3427104

AA seq 507 aa
MLLHDVAITSMDVAATSSRLTKVARIAALLHRAAPDTQLVTIIVSWLSGELPQRHIGVGW
AALRSLPPPAPQPALTVTGVDATLSKIGTLPGKGSQAQRAALVAELFSAATEAEQTFLLR
LLGGELRQGAKGGIMADAVAQAAGLPAATVQRAAMLGGDLAAAAAAGLSGAALDTFTLRV
GRPIGPMLAQTATSVHDALERHGGTTIFEAKLDGARVQIHRANDQVRIYTRSLDDVTARL
PEVVEATLALPVRDLVADGEAIALCPDNRPQRFQVTASRFGRSVDVAAARATQPLSVFFF
DILHRDGTDLLEAPTTERLAALDALVPARHRVDRLITSDPTDAANFLDATLAAGHEGVMA
KAPAARYLAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIHLGARDPATGGFVM
VGKTFKGMTDAMLDWQTTRFHEIAVGPTDGYVVQLRPEQVVEVALDGVQRSSRYPGGLAL
RFARVVRYRADKDPAEADTIDAVRALY

NT seq 1524 nt +upstreamnt +downstreamnt
gtgctccttcacgacgtggccatcacctcaatggacgtggccgccacctcgtcgcggctg
accaaggtcgcgcgcatcgccgccctgttgcaccgcgccgcgccagacacacagctggtc
acgatcatcgtgtcgtggctctccggcgagctgccgcaacgccatatcggtgtcgggtgg
gcggcattgcggtccctaccgccgcccgcgccgcaaccggcgttgaccgtcaccggtgtc
gacgccaccctctctaagatcggcactctaccgggcaaagggtctcaggcgcagcgcgcg
gcactcgttgcggaattgttctccgccgcaaccgaagctgagcaaacctttttgttgcga
ctgctcggcggtgaactgcgccagggcgcaaagggcgggatcatggccgatgcggtcgcc
caggccgccgggctcccggccgcgacggtccaacgcgccgcgatgctaggcggcgacctg
gcggcagcggcggcggccggcctgtccggcgcggcgctggacaccttcaccctgcgagtg
ggccgaccgataggcccgatgctggcacagaccgcgaccagcgtccatgatgcactcgaa
cgtcacggcggcacaaccattttcgaggctaaactagacggcgcgcgagtgcagatccac
cgggcaaacgaccaggtcaggatctacacccgaagcctggacgacgtcactgcccggctg
cccgaggtggtggaggcaacactggcactgccggtccgggatctagtggccgacggcgag
gcgatcgcgctgtgcccggacaaccggccgcagcgtttccaggtcaccgcatcacggttc
ggccgatcggtcgatgttgcggctgcccgcgcgacgcagccactttcggtgttcttcttc
gacatcctgcatcgggatggtaccgacttgctcgaagcgccgaccaccgagcggctggcc
gccctggacgcactggtgccggctcggcaccgcgtggaccggctgatcacgtccgatcca
acggacgcggccaacttcctggatgcgacgctggccgccggccacgagggggtgatggcc
aaggcaccggccgctcgttaccttgcgggtcgccgcggagcgggctggctgaaggtcaag
ccggtgcacacactcgacttggtggtgctcgcggtggaatggggctcgggacgccggcgc
ggcaagctctccaatattcacctgggcgcacgcgatccggctaccggtggattcgtgatg
gtgggcaagaccttcaaaggaatgaccgacgccatgctggactggcagaccaccaggttt
cacgagatcgcggtgggtccgacagacggctacgtcgtccaacttaggcccgagcaggtg
gtcgaggtagccctcgacggcgtgcaaaggtcgtcgcgctacccgggcgggctggcattg
cggtttgcccgcgtggtgcgctaccgcgccgacaaggacccggccgaggccgacaccatc
gatgccgtgcgcgcgctctactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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