KEGG   Mycobacterium tuberculosis EAI5: M943_14220
Entry
M943_14220        CDS       T02749                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mtx  Mycobacterium tuberculosis EAI5
Pathway
mtx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M943_14220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtx03019]
    M943_14220
Messenger RNA biogenesis [BR:mtx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M943_14220
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 RMMBL Lactamase_B
Other DBs
NCBI-ProteinID: AGQ35984
Position
complement(3050944..3052620)
AA seq 558 aa
MDVDLPPPGPLTSGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLI
LPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYR
ITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDG
RPTDLPGMSRLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESI
LLAENGVSVDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILSSGFVAVTVVVR
RGTGQPLAAPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtggatgtagaccttcccccgccaggtcccctgacctccggcgggttgcgggtcaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgacggttttcgaacacctgggccgactg
ttgattatcgactgcggtgtgttgtttcctggccacgacgagcccggtgtcgatctgatc
ctgccggacatgcgccatgtcgaagaccggcttgacgacatcgaggcgctggtgttgacc
cacgggcacgaggaccacatcggggcgattccgtttctgctcaagctgcgacccgacatc
ccggtcgtcggctcgaagttcaccttggctctggttgcagagaaatgtcgtgagtaccgc
ataacaccggtgttcgtcgaggtccgcgagggccagagcacccggcacggcgtgtttgag
tgcgagtacttcgccgtcaaccattccactccggacgcgttggccatcgcggtgtatacc
ggcgcgggaaccatcctgcacaccggcgacatcaagttcgaccaattgccaccggacggc
cgtcccaccgatctaccgggcatgtcgcggctcggcgacaccggcgtggacctgttgctg
tgcgactcgacgaacgccgagatccccggtgtcgggccatcggaaagcgaagtgggccca
acgctgcaccggctcatccggggtgccgacggacgggtgatagttgcgtgtttcgcctcc
aacgtggatcgggtacagcagatcatcgatgccgcagtggcattgggccggcgagtgtcg
ttcgtcggccgatcgatggtgcgcaacatgcgcgtcgcaaggcaactgggcttcctacga
gtggctgattccgatctcatcgacatcgccgccgccgaaacgatggcgcccgaccaagtt
gtgttgatcaccaccggcacccaaggcgagccgatgtcggcgttgtcgcgaatgtcgcgt
ggggagcatcgcagcatcacgttgactgctggtgatctcatcgtgttgtcgtcgtcgctg
atccccggcaacgaggaggcggtcttcggagtcatcgatgcactgtccaagatcggcgcc
agagtcgtcaccaacgcccaagcaagggtgcatgtttccggccacgcgtacgccggtgag
ctgctgttcctctacaacggggtgcggccgcgcaacgtgatgccggtgcacggaacctgg
cggatgctgcgcgccaatgccaagctggccgccagtaccggcgtaccgcaagagtcaatt
ctgttggccgagaacggtgtcagcgtcgacctggttgccggcaaagccagtatctccggt
gcggtgccggtgggcaagatgttcgtcgacggcttgatcgccggcgacgtcggcgatatc
accctgggcgagcggctcattttgtcgtcgggctttgtcgcggtgaccgtcgtggtcaga
cgtggcaccggccagccgttggctgcgccacatctacactcgcggggtttctccgaagat
cccaaggcgctcgaacccgccgtgcgcaaggtggaggcagagctggaatcgttggtggct
gccaacgtcaccgatccgatccggatcgctcaaggggtgcgccgcacggtcggcaagtgg
gtgggggaaacctatcgccgccagccgatgattgtgccgacggtcatcgaggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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