KEGG   Mucilaginibacter xinganensis: MuYL_3940
Entry
MuYL_3940         CDS       T05010                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
muc  Mucilaginibacter xinganensis
Pathway
muc03410  Base excision repair
muc03430  Mismatch repair
muc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:muc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MuYL_3940
   03430 Mismatch repair
    MuYL_3940
   03440 Homologous recombination
    MuYL_3940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:muc03400]
    MuYL_3940
DNA repair and recombination proteins [BR:muc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     MuYL_3940
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MuYL_3940
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MuYL_3940
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ASU35825
UniProt: A0A223P132
Position
complement(4187816..4189519)
AA seq 567 aa
MNKRWAVRAKADEDEVKSLAAALNIDPVLSTLLINRGVKSYDEARLFFRPDSRHLHDPFL
MAGMEQAVLRIEDAIAAGEKILVYGDYDVDGTTAVSLVYSFFKKYCHNLEYYIPDRYLEG
YGISTKGIDYAYEHGFSLIIALDCGIKSVDKIAYANTKGVDFIICDHHLPGDELPAAVAI
LDPKQAHCQYPFKELSGCGIGFKLIQAYAEKNNIPFSEVDCYLDLVAISIACDIVHITGE
NRVLAHLGLQKINSNPCMGVKTLMEVAGRGTFYTISDVVFLLGPRINAAGRIDDAKHAVE
LLIASEEIEAKEKSELINIRNTERKGHDLSITDEALGMIDSDEVLIGRKSTVLFNENWHK
GVIGIVASRLTEKYYRPTIVLTRSNGHVAGSARSVLGYDLYEALCGCSDLLIQFGGHKYA
AGLTMHPENVEAFAARFEEVVSATIKPEQLIQQIQIDAEIRLNQVEPKFFRILNQFAPFG
PENMAPVFISKNVYVSGYAAMVGTNHVKMTVMQDDSAMFDCIAFNQGEHLPQLKKNMPFD
MCYTIEENVWKEKRTIQLNVKGIRFSE
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaataaacggtgggctgtaagagctaaggctgacgaagatgaagtgaagagtttggct
gccgcgttaaatattgatcccgttttaagtaccctgctgataaacaggggggttaaaagc
tatgatgaggcccggttgtttttcaggcccgacagccgccacctgcacgatcccttttta
atggcaggtatggagcaggccgtgttgcggatagaggatgcaatagccgccggagaaaag
atactggtgtacggtgattatgatgttgatggtaccaccgcagtatcactggtttacagc
ttttttaaaaagtattgtcataatcttgaatattacatccctgaccgttacctggaagga
tatggaatctcgaccaaaggaattgactatgcatatgaacatggcttttctctcattata
gcgctcgactgcggcatcaagtcggttgataaaatagcttacgccaacacaaagggtgtt
gattttatcatctgcgatcatcacctgcctggcgatgagttacctgctgccgtagctatt
ctcgatcctaaacaagcccattgccaatatcctttcaaagaattgtcaggctgcggcatt
ggctttaagctgatccaggcgtatgccgaaaaaaataatatcccctttagcgaggtggat
tgctacctggacctggtagctattagcatagcctgcgatattgtacatataacaggagaa
aaccgtgtgcttgcgcatcttggcctgcaaaagataaacagcaatccatgtatgggtgta
aaaacgctgatggaggttgcgggcaggggtactttttataccatatcggatgttgttttt
ctattgggcccccgtattaatgccgccgggcgcattgacgatgccaaacacgcggttgaa
ctgctgattgccagtgaagaaattgaggccaaagaaaaaagcgagttgattaatataagg
aacaccgagcgcaaggggcatgacctttctataaccgacgaggctttgggaatgatagac
agcgatgaggtactaattggccgtaaatcaactgttttatttaatgaaaactggcataaa
ggtgttatcggcattgttgcatcgcggcttaccgaaaaatattaccgcccaactattgtg
cttacccgctccaacggccatgtggcaggttcggcgcgttctgttttgggatacgacctt
tacgaagcgctttgcggctgcagcgacctgctgattcagtttggcgggcataaatacgcc
gccgggcttaccatgcaccccgaaaatgtggaggcatttgcagcaaggtttgaggaggtg
gtaagcgctaccataaaaccggaacaattgatccagcagatacagattgacgcagaaata
cgtttaaaccaggtggaaccaaagtttttcaggatcctgaaccagtttgcgcctttcggg
cccgaaaatatggcgccggtattcataagtaaaaatgtgtatgttagcggttatgcggcc
atggtgggtactaaccacgtaaaaatgacggtgatgcaggatgattccgccatgtttgat
tgcattgcgtttaatcagggcgaacatttgccgcaactgaaaaaaaatatgccttttgat
atgtgttataccattgaagaaaacgtttggaaggaaaaaaggaccatacaattgaatgta
aagggaatcaggtttagtgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system