KEGG T00435: MUL

Mycobacterium ulcerans: MUL_3413

Entry

MUL_3413 CDS T00435

Gene name

ligB

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mul Mycobacterium ulcerans

Pathway

mul03410	Base excision repair
mul03420	Nucleotide excision repair
mul03430	Mismatch repair
mul03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mul03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mul03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mul03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mul03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

Pasteur:

UniProt:

Position

3781391..3782932

AA seq 513 aa
MLLIDIASTSLNVGGTSSRLAKVARIAEPLRAAAPDPELVAIVVAWLSGELRQRQIGVGW
ATLRSPPAAAGSPALTVTGTDAAFSEIGAVSGKGSAARRRELITRLFAASTETEQAFLVR
LLSGELRQGALAGIMVDAVARAAEVPATAVQRAAMLGGDLPTVAAACLAAGSSGAAGALD
SFTLRVGRPIGPMLAQSAGSITDALERHGGATIFEAKLDGARVQIHRTGDEVTVYTRSLD
DVTARLPEVVQATLALPVSDLVADGEAIALQPDGRPHRFQVTASRFGRSVNVAAAQAKQP
LSVFFSDILHRDGRDLLDAPTTDRLAALDAVVPARHRVDRLTTADAAAATDFLRATLAAG
HEGVMAKSPTAPYLAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIPLGARDAA
TGEFVMLGKTFKSMTDAMLDWQTARFTELAVGGTDGYVVALRPEQVVEVAFDGVQASSRY
PGGLALRFARVVRYRDDKGPADADTIDTVRALY

NT seq 1542 nt +upstreamnt +downstreamnt
gtgctcctcatcgacatagcaagcacttcgcttaatgtgggcggcacctcgtctcggctg
gccaaggtcgcacggattgccgagccgttacgcgcggccgcacccgacccggagctggtc
gcgatcgtcgtggcgtggctctccggcgagctgcggcagcgccagatcggcgtgggctgg
gccacgttgcggtcgccgcccgcggccgcgggtagcccggcgctcaccgtcaccggtacc
gacgcggcgttcagcgagatcggcgcggtgtcgggtaaggggtctgcggcccgccgccgc
gaactcatcactcggttgttcgccgcttcgaccgaaaccgagcaggcctttctggtgcgg
ctgctcagcggcgaactgcgccagggcgcgctggccgggatcatggtcgacgccgtcgcc
agggcggccgaagtccccgctacggcggtgcaacgagccgccatgctgggcggggattta
ccgacggtggcggcggcgtgcctggcggccgggtcatcgggcgcggccggcgcgctggat
tcgttcacgctgcgggtgggcagaccgatcgggccgatgctggcgcagagcgccggcagc
atcaccgatgccctcgaacgccatggcggtgcaacaattttcgaggcaaagttggatggc
gcccgggttcagatccaccgaaccggtgatgaggtcaccgtctatacccgaagcctcgac
gacgtcacggcccgcctgccggaggtggttcaggcaacgctggcgctgccggtcagcgac
cttgttgccgacggcgaggcgattgccctgcaaccagacggccggccgcatcgcttccag
gtcaccgcatcacgatttggccggtcggtgaatgtcgctgccgcccaagccaaacagccg
ctgtcggtgttcttctccgacatcttgcatcgggatggacgcgacctactcgatgcgccg
accaccgaccggctggcagccctggacgccgtggtgccggcccggcaccgagtcgatcgg
ctgaccaccgcagacgcggccgcggcgaccgattttctgcgggcaacactggccgccggc
cacgaaggcgtgatggccaaatcccccaccgcgccctacctggccggccgccgcggcgcc
ggatggctgaaggtcaaaccggtgcacacgctggacctggtggtgctcgcggtggagtgg
gggtcaggacgacgacgcggcaagctgtccaatattcccctcggcgcccgcgatgccgcc
accggcgaattcgtgatgctgggcaagacgttcaaaagcatgaccgatgccatgctggac
tggcagaccgcgcgattcaccgaacttgccgtggggggcaccgacggctatgtggtcgcg
ctgcgccccgagcaggtggtcgaggtggccttcgacggcgtgcaggcgtcctcgcgttat
cccggcgggctggcgttgcgcttcgcccgggtggtgcgctaccgcgacgacaaggggccg
gccgacgcagacaccatcgacaccgtgcgggcgctgtattga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   PASTEUR-MUL (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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