| Entry |
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| Gene name |
rne
|
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| Definition |
ribonuclease E Rne
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| Orthology |
|
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| Organism |
mul Mycobacterium ulcerans
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| Pathway |
|
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| Class |
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH: mul03018]
 |
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: Pasteur: UniProt: |
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| Position |
complement(4140583..4143549)
 |
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| AA seq |
988 aa  
MVDGAPSSDPENEPTQREDLPDRLRVHSLARTLGTSSRRVLDALSALDGRIRSAHSSVDR
VDAVRVRDLLAEQPAEEGQAEEDQQAPDAVAAEVPDAPGEPAEPESRLMLETQETVQVVE
TWVERPHYMPLFVAPQPISEPVAGDDADDESGDEGDDDEEQADRPGNRRRRRGRRGRGRG
RGEQGANDGQDQPGDDGDEAPQKAGGNSTSSDDSEAQDGADSEESDNGDDDNGSADGASR
RRRRRRRRKSGAGDDGDEGPAPDDPPNTVVHERAPRSGDKSGNSDSGDDSGGNEIKGIDG
STRLEAKRQRRRDGRDAGRRRPPVLSEAEFLARREAVERVMVVRDRVRTEPPHPGSRYTQ
IAVLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNW
DAAGLGGADRKIEQALKPGDYIVVQVSKDPVGHKGARLTTQVSLAGRYLVYVAGASSTGI
SRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEDDIRADVTRLQERWNQIEAKAVE
IKQKAAGAAVALYEEPDVLVKVIRDLFNEDFAGLVVSGDDAWDTINEYVSSVAPDLVSKL
SKYEPAVGSEGQVGPDVFAVHRIDEHLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGK
FTGSGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEAL
ARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTSCPHCSGRGILLHADPVDSAPTTGR
KADSGGRRNRRSKKNRAEEPSEKEAVAKVPTYAPGEHPMFKAMAASSSSEAEHGDGEVEE
SGEELTAAVDDQTAVQVALDLGETEESEETDGTDETDDFDDDSDDSDDSDEDDDTDETND
TDVDADEDEDTDDDSDEDEDTEDDDELDDDLDDELDDDDSDSDDEDSESELTEPAAGRPA
ALEVTTIAERPRRRRAAGRPAGPPIHLG |
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| NT seq |
2967 nt  +upstreamnt +downstreamnt
gtggtagacggtgccccatcttcagacccggaaaacgagccgacacagcgtgaggacctg
ccggaccgcctgagagttcactcactggcgcgaacgctgggaaccagtagccgtcgggtg
ctggatgcgttgagtgcgctcgatgggcggattcgcagcgcccattccagtgtggaccgc
gtcgatgcggtccgggtgcgcgacctgctggccgagcaacctgccgaggagggccaggcc
gaggaggaccagcaagctcctgacgccgtggccgctgaggtgcccgatgcgcccggcgaa
cccgccgagcccgaatcgcgcctgatgctggaaacccaggagacggtgcaggtcgtcgag
acctgggtggagcggccgcactacatgccgctgtttgtcgcaccccagccgatttcggag
cccgtcgctggcgacgatgccgatgacgagtcgggcgacgaaggtgacgatgacgaagag
caggccgaccggccgggcaaccggcgccgccgccggggtcggcgcgggcgcggccgcggg
cgcggcgagcagggcgcaaacgacggtcaggaccaacccggcgacgatggtgacgaggcc
ccgcagaaggcggggggcaactccacgtcatcggacgacagcgaggcgcaagacggcgct
gactccgaagagtcggacaacggcgacgacgacaacggttcggccgacggcgccagccgg
cgtcggcgccggcgccggcgccggaagtcgggtgctggtgatgacggcgacgagggtccg
gccccggatgacccgcccaacacggtcgtacacgagcgtgccccccgctccggcgacaag
tcgggcaactcggatagcggtgacgattccggtggcaacgagatcaagggcatagacggc
tcgacacggctggaagccaagcggcagcgccgccgcgacgggcgtgacgccggacggcgc
cgcccaccggtgttgagtgaggccgagttcttggctcgtcgcgaggcggtcgagcgggtg
atggtggtgcgcgaccgggttcgcaccgagccgccccacccgggctcgcgttacacccag
atcgcggtgcttgaagacggcatcgtcgttgagcactttgtgacctcggctgcttctgcc
tccctggtgggcaacatctacctggggatcgtgcagaacgtgctgccttcgatggaggcg
gcattcgtggatatcggtcgtggccgcaacggcgtgctctacgccggtgaagtcaactgg
gacgcggcgggcctcggcggggccgaccgcaagatcgaacaggctctcaagccaggcgac
tacatcgttgtgcaggtcagcaaggacccggtcggccacaagggtgcccgactgacgaca
caggtatcgctggcgggccgctatctggtgtacgtggcgggtgcgtcatcgaccgggatc
agccgcaagctgcccgacaccgaacgtcagcggctcaaggaaatcctgcgtgaggtggtg
ccctccgacgccggcgtgatcattcgaaccgcgtccgagggtgtcaaagaggacgacatc
cgtgcggacgtcacccggctgcaggagcgctggaaccagatcgaggccaaggccgtcgag
atcaaacagaaggccgcgggcgccgcggtagcgctctacgaagagcccgacgtgctggtc
aaggtcatccgggatctgttcaacgaagacttcgccgggctggtcgtatccggggacgac
gcgtgggacaccatcaacgagtacgtgagctctgttgcccctgatttggtttccaagctg
agcaagtacgaaccggccgtcgggtcggaggggcaggtcgggccggatgtctttgcggtg
catcgcatcgacgagcacctggccaaggcaatggatcgcaaggtgtggctgccctcgggc
ggcactctggtgatcgaccggaccgaagcgatgacggtggtcgacgtcaataccggcaag
ttcaccggttccggcggaaacctcgagcagacggtgaccaagaacaacctggaggccgcc
gaggagatcgtgcgccagctgcggctgcgcgacatcggtggcatcgtggtgatcgacttc
atcgatatggtgctggagtccaaccgtgacctggtgctgcgccggctgaccgaggcgttg
gcccgcgaccggacccgtcaccaggtgtcggaagtgacttcgctgggtctggtccaactg
actcgcaagcggttggggaccgggctgatcgaagccttctcaacctcctgtccgcactgc
agcggccgtgggattctgctgcatgccgacccggtggattcggcgccgacgactggacgt
aaagctgactcgggtggtcggcggaaccgccgatcgaagaagaaccgcgccgaagagccc
agcgagaaggaggccgtggccaaggttcccacctacgccccgggcgaacacccgatgttc
aaagccatggccgcgagttcgtcatcggaggccgagcacggtgacggggaagtcgaggag
tccggcgaggagttgaccgccgcggtcgacgaccaaaccgcggttcaggtggcccttgat
ctcggcgagaccgaagagtccgaagagaccgacgggaccgacgagaccgacgattttgat
gacgactcggacgactcggacgactcggacgaggacgacgacaccgacgagaccaacgac
accgacgttgacgccgatgaggacgaagacaccgacgacgactccgacgaggacgaagac
accgaagacgacgacgaactcgacgacgacctggatgacgagctggatgacgacgattcg
gatagcgacgacgaggatagtgagagcgaactcacagagccggctgctggccgtcccgca
gccctcgaggtcaccacgattgccgagcgcccgcgccggcggcgtgcggccggccggccg
gccggtccgcccatccatctgggctga |
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