KEGG   Musa acuminata (wild Malaysian banana): 103995750
Entry
103995750         CDS       T03447                                 
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03022  Basal transcription factors
mus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103995750
  09124 Replication and repair
   03420 Nucleotide excision repair
    103995750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mus03021]
    103995750
   03400 DNA repair and recombination proteins [BR:mus03400]
    103995750
Transcription machinery [BR:mus03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103995750
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103995750
SSDB
Motif
Pfam: BSD PH_TFIIH I_LWEQ
Other DBs
NCBI-GeneID: 103995750
NCBI-ProteinID: XP_009414712
UniProt: A0A804HVT7
Position
1:17778479..17794879
AA seq 602 aa
MAAISKVAKYKTTVKEPGIPGVLNMMEDVFTFTPHDPRSAMKLRVDFRNIKGHKFSKDGS
KQALLNLTQDSEKGGGYIFEFNNFTERNDCRDFVGKVLGKFQALVSKQNDEPTSEKSAVS
LEQLSTIEMERRMKLLREDSELQKLHKELVIGNVLTESEFWATRKNLLDDDSDRTLKQRT
GFKSAMLADIRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPSKMTEKDFWTK
YCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILADEARRKIRRVDPTLDMEADLGDD
YIHLPDHGILRDGSKETADSENDLARRTLAQDVNRHAAVVLEGRALDIELGDTRAVAEAL
ARSKQESSADTLDENSNLERQERVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQVNA
LKALGGTGAGSKTIDYSLNSEEAYSYLMHQISEVKAQGLHNPIVQSEVACKVLSGLTQQI
SSTRYHLGKNPQESVLDRLPKRTKDEIMLHWTSIQELLRHFWSSYPITTSYLYNKVLRLK
SAMTDIYQKLKAIKDVQSDFRHQISLLVQPMLQALDAAFAHYDAEEHKHSKKNGAKPNGF
VQ
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcggcgatcagcaaggtggccaagtataagacgacggtgaaagagcccgggattccg
ggcgtgcttaatatgatggaggatgtatttacttttactcctcatgatcctagatcagcg
atgaagcttagagtggactttagaaacattaaaggtcataaattcagtaaagatggttca
aagcaagcattattaaatcttacacaagattctgaaaaggggggaggctacatttttgag
tttaataattttactgaacgtaatgattgtcgagattttgtagggaaagttctagggaag
ttccaggctttggtgtccaagcaaaatgatgaaccgacctctgagaaatctgctgtatca
cttgaacaacttagcactatagagatggaacgcagaatgaagttgttgcgggaagatagt
gaattgcaaaagctgcacaaggagctcgtcattggcaatgtgctgacggaatctgagttt
tgggctacaagaaagaatctactagacgatgattctgatagaacattaaagcaacggaca
gggtttaaaagtgctatgcttgcagatataaggccatcaactgatggtcggaccaataag
gtcacgtttagccttacgccggagattattcaccagattttcgctgaaaaacctgctgtt
catcgggcatttttgaattttgttccaagcaagatgacagaaaaggatttctggacaaaa
tactgtagagctgaatatctccacaggacaaaaaattctgtagccgctgcagcagaggca
gctgaagatgaagaacttgctgtctttctgaagcatgatgacatattggctgatgaagct
cggcgtaagatcagacgggttgatccaaccttggacatggaagctgatttaggtgatgac
tacatccatcttcctgatcatggaattcttcgtgatggtagcaaagagactgcagattcg
gagaatgatttagctcggaggactcttgcacaagatgttaatcgtcatgcggctgttgtt
cttgaagggagggcactagatattgaattgggagatacgcgagctgtagctgaagcactt
gctaggtccaaacaagagtcatctgctgatactttagatgagaattctaatctagaacga
caagaaagagtttcacgtatgaccgagattgaagatcttcaggctcctcatagccttcca
tatgcaccactttgcatcaaggatccacgggagtattttgattctcaacaagtcaatgcg
cttaaagctttaggcggcactggtgctggttccaaaacaatcgattacagcctaaattct
gaggaggcttatagttatctaatgcatcagatctctgaggtgaaagctcaagggttgcat
aatccaattgttcaatctgaagttgcttgtaaggttctgagtgggcttacgcaacagatt
tcaagcaccagatatcatcttgggaagaatcctcaggagagcgttcttgatagattacct
aaaaggaccaaagatgaaattatgcttcattggacatcaattcaggagttacttcgtcat
ttttggtcatcatatccaattacaactagttacctatataataaggtcctcaggttgaag
agtgctatgacagatatctatcagaagctcaaggctattaaggatgtgcaatcagatttc
cggcatcagatctctctccttgttcagcccatgctacaggctttggatgctgcattcgct
cattatgatgctgaagaacataagcattccaaaaagaatggggctaaaccaaatgggttt
gttcagtaa

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