KEGG T00449: Mvan

Mycobacterium vanbaalenii: Mvan_2025

Entry

Mvan_2025 CDS T00449

Gene name

ligB

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mva Mycobacterium vanbaalenii

Pathway

mva03410	Base excision repair
mva03420	Nucleotide excision repair
mva03430	Mismatch repair
mva03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mva03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mva03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mva03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mva03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2165517..2167121)

AA seq 534 aa
MLLVDVANASADVAAMSARLAKVARIAELLRTAGRQGDARLVRVVVSWLSGELTQRQIGV
GWRSVRSVPDPAAQPSLTVEDVDARFGEIGSTSGKGSQARRAALLAELFAAATAVEQVFL
RRLLTGELRQGALGGVMADAVGKAAGVPSAVVRRAAMLGGDLPAVAAAAVTDGESALAQF
TLQVGRPVGPMLAQTATGVADALDRFGGTALFEAKLDGARVQIHRRGDAVSVFTRSLDDV
TARLPEVVDATLALPVTELIADAEAIALRPDGRPHRFQITASRFGRRGGTPDAGTQRLSV
FFFDLLHADGVDLLDLPTGERIATLDATVPREQRVDRLLTSDPEAAQAFLDATLAAGHEG
VMAKSPTAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPATGG
FVMLGKTFKGMTDEMLAWQTERFLELADGAAPAATADHGAAPAATADHGAADGFTVTVRP
EQVVEIAFDGIQTSSRYPGGMALRFARVLCYRDDKTAAEADTIDTVRALHERAN

NT seq 1605 nt +upstreamnt +downstreamnt
gtgctgctggttgacgttgccaacgcgtccgccgacgtcgcggccatgtcggcgcggctg
gccaaggtcgcgcgcatcgccgagctgctgcgcacggccggccgacagggcgacgcgcgg
ctcgtccgcgtcgtcgtgtcctggctgtccggcgagctgacccagcgccagatcggtgtc
gggtggcggtccgtgcgctcggtgcccgaccccgccgcccaaccgagcctcacggtcgag
gacgtcgacgcccggttcggggagatcgggtccacctccggcaaggggtcccaggcgcgc
cgcgcggcactgctggctgaactcttcgctgcggccaccgccgtcgaacaggttttcctg
cgccgcctgctcaccggggaactgcgccagggcgccctcggcggggtgatggccgacgcg
gtcggcaaggccgcgggcgtcccctccgccgtggtgcgtcgcgccgcgatgctgggcggg
gaccttcccgcggtcgccgccgcggccgtcaccgacggcgagtccgccctcgcacaattc
accctgcaggtcggcaggccggtgggcccgatgctggcccagaccgccaccggcgtcgcc
gatgcgctcgaccgcttcggcgggacggcgctgttcgaggccaagctggacggcgcgcgc
gtgcagatccaccgccgcggcgacgcggtgtcggtcttcacccgcagcctcgacgacgtg
acggcgcggctgcccgaggtggtcgacgcgacgctggcgctgccggtcacggagctgatc
gccgatgccgaggcgatcgcactcagacccgacgggcgtccgcaccggttccagatcacc
gcctcacgcttcggccgccgcggtggtacgcccgacgcgggtacacagaggctgtcggtg
ttcttcttcgacctgctgcacgccgacggggtcgacctgctcgacctgcccaccggcgag
cgcatcgccacgctcgacgcgacggtgccccgcgagcagcgcgtcgaccgcctgttgacc
tccgacccggaggccgcgcaggcgtttctcgacgcgacactggccgcgggacacgaaggc
gtgatggccaagtcgccgaccgcaccgtacgaagccggtcgacgcggggcgggctggctc
aaggtcaaacccgtgcacaccctcgacctggtggtgctcgccgtggaatggggatcgggc
cggcgcaccggcaagctgtccaatatccatctcggtgcacgcgacccggcgaccggcggt
ttcgtcatgctcggcaagacgttcaagggcatgaccgatgagatgctggcctggcagacg
gaacgctttctcgagttggccgacggagcggccccggccgcgacagcagaccacggagcg
gccccggccgcgacagcagaccacggagcggcggatggattcaccgtgacggtgcggccg
gagcaggtcgtcgagatcgcgttcgacggaatccagacgtcctcgcgttaccccggtggg
atggcgctgcgcttcgcccgggtgctgtgctaccgcgacgacaagaccgcagccgaggcc
gacaccatcgacacggtgcgtgcactgcacgaacgcgcgaactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MVA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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