KEGG T03029: X875

Mannheimia varigena USDA-ARS-USMARC-1388: X875_2440

Entry

X875_2440         CDS       T03029

Name

(GenBank) Ribosomal large subunit pseudouridine synthase C

K06179

23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]

Organism

mve Mannheimia varigena USDA-ARS-USMARC-1388

Brite

KEGG Orthology (KO) [BR:mve00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mve03009]
    X875_2440
Enzymes [BR:mve01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     X875_2440
Ribosome biogenesis [BR:mve03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    X875_2440

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AHG78864

Position

complement(262088..263050)

AA seq 320 aa
MTTEKVISAAVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPE
YKLQPDDVVRVPPVRVAEKNEAPISTKLNKVAELEDQILYEDDVILVINKPSGIAVHGGS
GLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRSLHEQLREKVVQKDYL
ALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKPSETRFSIEERYANATLVKASPV
TGRTHQIRVHTQYAGHPIALDDKYGDNDFDSKMKEAGLHRLFLHAYSIRFEHPRTGEEMV
ITAQLDKALKGVLAKLRAEK

NT seq 963 nt +upstreamnt +downstreamnt
atgacaacagaaaaagtaattagtgccgcagtgcaattttttaccatcagtgaagatgaa
gccgggcagcgtttagataattttttattagcgaaactgaaaggcgtgccgaaaagcctg
atttaccgcattgtgcgtaagggcgaggtgcgagtgaacaaagggcggattaagcccgag
tataaacttcagcccgatgacgtggtgcgtgtgccgccagtgcgtgtggcggagaaaaac
gaagctccgatttccaccaagctcaacaaagtcgcagaattggaagatcaaattctgtat
gaagatgacgtgatactggtgatcaacaagccgtcaggcattgcggtgcatggcggcagc
ggcttgagtttcggcgtgattgaagctctgcgagcgttacgtccacaagcccgtttttta
gagctagtgcaccgtattgaccgtgatacctcgggtattttgctggtagcgaaaaagcgt
tctgcgttgcgtagcctacacgaacagttacgggaaaaagtggtgcaaaaagattactta
gcattagtgcgaggtcagtggcaggctcacaccaaagtgattaaagctccgttgctaaaa
aacgaattggcaagtggtgaacgtattgtgcgagtgagtgaagaaggcaaaccttctgaa
actcgttttagcattgaagagcgttatgctaatgctacattggtgaaagcctcaccggtg
acaggcagaacccaccaaatccgtgtgcatacccaatacgccggacacccaattgcgttg
gatgacaaatacggcgacaatgatttcgacagcaaaatgaaagaagccggtttacaccgt
ttatttctacacgcttattccatccgttttgaacatccgagaacaggggaagagatggtg
attaccgcacagctagataaagccttaaaaggcgtgttggcgaaattaagggcggagaaa
tag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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