KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_5880
Entry
X875_5880         CDS       T03029                                 
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:mve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mve03019]
    X875_5880
   03009 Ribosome biogenesis [BR:mve03009]
    X875_5880
Messenger RNA biogenesis [BR:mve03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     X875_5880
Ribosome biogenesis [BR:mve03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    X875_5880
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AHG79206
Position
615258..615812
AA seq 184 aa
MSQDAQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGPVLAVHQSDELLGKMSD
WCVKTHTANGLIERVNASKLTERAAELQTIDFLKRWVPKGSSPICGNSIAQDKRFLYKYM
PDLADYFHYRHLDVSTLKELVRRWKPEILDNFSKGNTHLALDDIRESINELKFYREHFIN
LDEK
NT seq 555 nt   +upstreamnt  +downstreamnt
atgagccaagatgcacaaaatctaatttggatcgatcttgaaatgaccggtttagatccg
gaaaaagaacgcattattgaaatagcaactattgtgactgataaagatctgaatatttta
gcggaaggtccggttttggcggttcatcaatctgatgaattattaggaaaaatgagtgat
tggtgtgtgaaaacccatacggcaaacggcttaattgagcgagtgaatgcgagtaaactc
actgagcgtgcggcagaattacaaactattgatttcttaaagcgttgggtgccaaaagga
agttcgccaatttgtggcaacagtattgcacaggataaacgtttcctttataaatatatg
cctgatttagcggattatttccactaccgccatttagacgtgagtacgctcaaagagttg
gtaagacgctggaagccagaaattctcgacaacttcagcaaaggtaatacgcacttggcg
ttagacgatattcgtgaatccatcaacgaattaaaattttatcgggaacattttattaat
ttagacgaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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