KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_9390
Entry
X808_9390         CDS       T03027                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mvi03021]
    X808_9390
   03009 Ribosome biogenesis [BR:mvi03009]
    X808_9390
Transcription machinery [BR:mvi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     X808_9390
Ribosome biogenesis [BR:mvi03009]
 Prokaryotic type
  rRNA transcription factors
   X808_9390
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 KH_2 KhpA-B_KH S1
Other DBs
NCBI-ProteinID: AHG75462
UniProt: W0QAZ3
Position
976172..977668
AA seq 498 aa
MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDIDVRVVVDRKTGDFQTFR
RWAVVESVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEFGRVAIQTFGQVVKTKIRE
AEKTKIIDEFRSDLGKIIMATVKKVTRDNIFLELAGKTEDIKGEAVIVREDMIPRENFRP
GDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEVPEIGEGVIEIKGSARDAGSRAK
IAVKTHDKRIDPVGACVGMRGARVQAISNELGGERVDIVLWDENPAQFVINAMAPADVSS
IVINDEAHSMDIAVESKNLAQAIGRNGQNVRLATQLTGWALNVMTNEELTQKNAEEDGKV
INLLTSALEIDEEFAQVLIEEGFTSLEAIAYVPVDALTAIDGLEDEDLVEELQSRAKNAI
TKKALEEEEALKSAHIEERLLMLEGIDRHIAFKLAEKQITTLEELAEQGVDDLADIEELS
EEKAGELIMAARQICWFN
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagtaaagagattttattagctgcagaagcagtatcaaacgaaaagcaattaccaaaa
gaagcgatttttgaagcattggaaactgcgctaaccattgcaactaaaaaaagccgtgat
ttagacattgacgtgcgtgttgttgtagatcgcaaaacaggtgatttccaaacatttcgc
cgctgggcagtagttgaaagcgtaaataatatgacgcgtgaaatcagcttagaagctgct
cagtttgaagatccaaatgtacaattgggtgattttattgaagatgaagttgaatccatt
gaatttggccgtgtagcaattcaaactttcggtcaggttgtgaaaaccaaaatccgcgaa
gcggaaaaaaccaaaattattgatgaatttcgttcagatttaggcaaaattattatggct
actgttaagaaagtaactcgtgataatattttccttgaattagcgggcaaaaccgaagat
atcaaaggtgaagcggtgatcgtgcgcgaagatatgattccgcgtgaaaacttccgccca
ggcgaccgtgtacgtggtgtgttatatgagatcaaacctgaatcaaaaggtcctcaactg
tttgttacccgtgcaaaaccagtgatgcttgaagagttatttaaacttgaagtgcctgaa
attggcgaaggggtgattgagatcaaaggctctgctcgtgatgcaggttctcgtgcgaaa
attgcagtgaaaacacacgacaagcgtattgacccagtaggtgcttgcgtgggtatgcgc
ggagctcgagttcaagcaattagtaatgagctcggtggcgagcgtgtcgatatcgtactt
tgggacgaaaacccagcacaatttgtgatcaacgcaatggctcctgcagatgtcagctca
attgtgatcaacgatgaggctcactcaatggacatcgctgttgagagcaaaaacttggcc
caagcgattggccgtaacggtcaaaacgtgcgtttagcgactcaactaactggttgggca
ttaaatgtgatgactaatgaagaattaacgcagaaaaatgcggaagaagacggtaaagta
atcaatttattaacctctgcgttggaaattgatgaagaatttgctcaagtattgattgaa
gaaggcttcacttcattagaggcgattgcttatgtaccagttgatgctttaacggcaatt
gatggcttagaagatgaagacttagttgaagagctacaatctcgtgcaaaaaatgcgatc
actaaaaaagccttagaggaagaagaggcattaaaatcggctcatattgaagagagatta
ttaatgcttgaagggatagatcgtcatatcgcattcaaattagcggaaaaacagattaca
actcttgaagaacttgcagaacaaggcgttgatgatttggctgatattgaagagctatca
gaagaaaaagcgggtgagttaattatggctgcacgtcaaatttgttggttcaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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