KEGG   Mannheimia sp. USDA-ARS-USMARC-1261: X781_15190
Entry
X781_15190        CDS       T03026                                 
Name
(GenBank) Exodeoxyribonuclease V
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
mvr  Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    X781_15190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvr03400]
    X781_15190
Enzymes [BR:mvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     X781_15190
DNA repair and recombination proteins [BR:mvr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     X781_15190
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 ResIII PDDEXK_1 DEAD AAA_25 AAA_11 SspN
Other DBs
NCBI-ProteinID: AHG73666
UniProt: W0Q543
Position
complement(1561827..1565351)
AA seq 1174 aa
MQNLNPIKLPLNKSVLIEASAGTGKTFTIANIYLRLLLGVGVMPLTVEQILVVTFTKAAT
EELKNRIRKNIQQCADFLKDKVNGEKTENKSYANNLEFLEHLYPHINHIHEALLRLSIAE
REIDTASVFTIHSFCQKMLVQFAFESGVRFDLDLQPNQSDLLKKLSEDVWREQFYPQGVK
ESEIISAELTTPERALSAVRNYLASELPKPKAFLAQDFTEQLAQYNRFIDEVKSYWKANG
EALVEAIRHDLKNKTTLHGSWYRSATFETGVIVMNQWVNSSNRDLPDEFYLFTTEKIAAG
TKKSCEPMDLPQLAKNQDFLTAYQQQFENSLKAILLYQFLISLKTKLAEYKQSHPERGFD
DLLTMLNQALKNPQTGKALAQKIRSIYPFAMIDEFQDTDLTQYEIFSQIFMEGQSDNGFI
MIGDPKQSIYKFRGADIFTYLRAAKQADEQFTLGKNWRSLPEVVQAVNNLFYFANKDKSP
FLYDDIGFHPVEADGRKGKLMSEQGHFVCYTRDKTNLDERAEICAYQIHQQLKAMNEGKF
GIEKNGEFSPFEPKDITILVRKGSQAKRIKKALAKRNIKSVYLAESASVFGSEIATELCW
ILQAGLNPYNYKALLSALGSTLWGLSAVEIYRYKENEMLWDLKVNQFVEYSTIWKEQGIL
PMLHKIYLEQGIIERLKGLPNADRLITDLLHLTEILQETSQALESEAELVRWYEKQISSP
DFNDEQQLRLESEEELIKIVTIHGSKGLQYPIVWLPFAAEKSEGDTKVNLGLYRNQKGDL
DWYLGEEEAKEQIQNEAYAEDLRLFYVALTRAESQLNLVLPKMISGWSPLHYLLAEGELP
KDEVSVADYFEKKQISADIIEVAEHLPFSRWESGKTEESYQAKTFSGNIRVVGQITSFTS
LYAQHERFSEGKAERVIDLAQDKDVHIDLIEPDYTMETDAFSPFQFPHGIKVGTVLHSFF
EHCRFGEQIDKESVAKVCEQLGLSEEWLEPTLGWFERILATPLPEANFCLKEIDETKRLN
EWQFYLRLKNDKALHQLNALLKQHSPLAKNLPELQLPQLEGFVRGFVDCIVQMNGKFYLI
DYKSNFLGYLPQNYSTENIQREMGRQRYDLQYLLYTLAVHRYLTVRLSENYDYERDFGGV
AYLFLRAMNGESASGVYFDKPSKLLIEEMDRLFG
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgcaaaatctaaatcctattaaattacccttaaataaatctgtcttaattgaagcctct
gccggtacggggaagacgtttaccattgccaatatttacttacgtttattgctaggcgta
ggtgttatgcctttaactgttgagcaaattttagtggtaacttttaccaaagcagcaacg
gaggagctgaaaaatcgtatccgaaaaaatattcagcaatgtgccgattttttaaaagat
aaagtgaatggggagaaaacagaaaataaatcttatgctaataatctcgaatttttagag
cacctctatccgcatatcaatcacattcacgaagcattattacgtttgagcattgccgaa
cgtgaaattgatactgccagtgtttttaccattcacagcttctgtcaaaaaatgttggtg
caatttgcctttgaatcgggcgtgcgatttgatcttgatttacagccgaaccaatctgat
ttactgaaaaaattaagcgaagatgtatggcgagagcagttttatccgcaaggggtaaaa
gaaagtgaaattatttcagctgaattaactacaccggaaagagcgttaagtgcggtaaga
aattatttagcaagtgagttgcccaagccgaaagcgtttctagctcaagattttacggaa
cagttggcacaatataatcgatttattgatgaagtgaaatcttactggaaagccaatggt
gaagcgttagtggaagccattaggcacgatctcaaaaataaaacgacgttacacggtagt
tggtatcgctctgctacttttgaaacgggtgttattgtgatgaaccaatgggtaaattcg
tcaaatcgtgatttgccagacgagttctatctgtttactacggagaaaatagccgcaggc
acgaagaaaagttgtgagccaatggatttacctcaacttgcaaaaaatcaggattttttg
accgcttatcagcagcagtttgaaaatagcttaaaagcgattttactctatcaattttta
ataagcttaaaaaccaagctggcagaatataagcaatcgcacccggagcgtggttttgat
gatttactcacaatgcttaatcaagcgttgaaaaatccgcaaacaggtaaagcgttagcc
caaaaaattcgctctatttacccctttgcgatgatcgatgagttccaagataccgatcta
acccaatatgaaattttcagccaaatttttatggaagggcagagcgataacggctttatt
atgatcggtgatccgaaacagtcgatctacaaatttcgtggggcggatattttcacttat
ttgagagcggcaaagcaggctgacgagcaatttacgcttggcaaaaactggcgttctttg
cctgaagtagtgcaagcggtcaataatttgttttattttgcaaataaggataaatcgcca
tttctttatgatgacatcggttttcaccctgttgaagcagacggtcgcaaaggtaagcta
atgagtgagcaagggcattttgtttgctacaccagagataaaaccaatctcgatgagaga
gcagaaatttgtgcataccaaatccatcaacaacttaaggcaatgaatgaggggaaattc
gggattgagaaaaatggcgagttcagcccttttgagccaaaggatattaccattctagtg
cgaaaaggctcacaagcaaaacgcattaaaaaagccctagccaagagaaatattaaatcc
gtttatttagcggaatcggcttctgtatttggttctgaaattgcaactgaactttgttgg
attttgcaagccgggcttaacccttacaattataaagcattattatccgctttaggttca
accctttgggggctaagtgcagtagaaatttatcgctacaaagaaaatgaaatgttgtgg
gatttaaaggtcaatcagtttgtggaatacagcaccatttggaaagagcaaggcattttg
ccgatgttgcataaaatctatttggagcaaggtattattgaacgattaaaaggcttgcca
aatgcggatcgtttgattacagatttgctccatttaaccgaaattctgcaagaaacatcg
caggcgttggaatctgaagcggaactggtgcgttggtatgaaaagcaaattagctcaccc
gattttaatgatgaacagcaacttcgccttgaaagtgaagaagagctgattaaaattgtt
accattcacggctcgaaaggattgcaatatccgattgtttggttgccgtttgcagcggaa
aaaagcgagggcgatactaaggttaatttaggcttgtatcgtaatcaaaaaggtgatctg
gattggtatttaggtgaagaagaggcgaaagagcaaattcaaaatgaagcctatgcggaa
gatctccgtctgttttatgttgcattaacccgtgcggaatctcagctcaatttagtgtta
ccaaaaatgatttcaggctggagcccgttacattatttattggcagaaggtgaattaccg
aaagatgaagtgagtgtggcagactattttgagaaaaagcagatttcagccgatattatt
gaagtagcagagcatttaccttttagccgttgggaaagtggtaaaacggaggaaagttat
caagccaaaacctttagtggcaatattcgggtagtggggcagattacgagctttacttca
ctttatgcacaacacgagcgttttagtgaaggtaaagcagaaagagtgatagatttagcc
caagacaaagatgtccatattgacctcattgagccggattacacgatggaaactgatgct
ttttcaccattccaatttccgcacggcattaaagttggtactgtgttgcacagttttttt
gagcattgccgatttggcgaacaaattgataaagaaagtgtggcgaaagtgtgtgaacaa
ttaggtttaagtgaagaatggctcgagccaacattaggctggtttgagcgtattcttgct
actcctctgccggaagcaaatttctgtttaaaagagatcgatgaaactaaacggttaaat
gaatggcaattctatttacgcttaaaaaatgataaagctttgcaccaattaaatgcgtta
ttaaaacaacatagccctttagcaaaaaatttgcctgaactgcaattaccgcaattagaa
ggctttgtgcgtggctttgtggattgtattgtgcagatgaatggaaaattctatcttatt
gactacaaatcgaatttcttaggttatttgccacaaaattattccacagaaaatattcag
cgagaaatgggcagacagcgttatgatttacaatatttgctttatactcttgccgtgcac
cgttatctaactgttcgtctaagtgaaaattacgattatgaacgtgattttgggggcgtt
gcgtatcttttcttacgggctatgaatggagagagtgcaagcggtgtttattttgacaaa
ccaagcaaattgctaattgaagaaatggataggttgtttgggtag

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