KEGG   Mannheimia sp. USDA-ARS-USMARC-1261: X781_15260
Entry
X781_15260        CDS       T03026                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03578  ATP-dependent helicase HrpA [EC:3.6.4.13]
Organism
mvr  Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:mvr00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    X781_15260
SSDB
Motif
Pfam: DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_19 AAA_22 nSTAND3 T2SSE ABC_tran ResIII SLFN-g3_helicase NACHT SRP54 AAA_23 RsgA_GTPase AAA_30 HA2_N DNA_ligase_A_N AAA_24 PhoH
Other DBs
NCBI-ProteinID: AHG73673
UniProt: W0Q8V4
Position
1571402..1575316
AA seq 1304 aa
MMKKNLRKNEENQPLVKLENITTSDFRRLLGRLKGAENIKNEANKRSVLDEILQDLTACQ
ARFFIRQTHAQNLKIDYPDLPVSARREEILKLIAENQVVVIAGETGSGKTTQLPKMCLEL
GRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKVRFNDQVSENSLVKLMTDGI
LLAEIQNDRYLNQYDTLIIDEAHERSLNNDFILGYLKQILHKRPDLKVIITSATIDVERF
SKHFNNAPIIEVSGRTFPVEVRYRPIVEEEEQDQLQGILNAVDELQSEGRGDILIFMNGE
REIRDTAEALQKQELRHTEILPLYARLSATEQQRIFQPSGGLNRIILATNVAETSLTIPN
IKYVIDTGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRISEGICIRLYSEEDFNA
RPQFTDPEILRTNLASVILQMTSLGLSDIASFPFVDAPDSRQIQDGIRLLEELQAIIPNR
NGARLSTHKLTLIGKQLAQLPVDPRLGRMIIEASKNGSLHEVMMIVSALSIQDPRERPQE
KQQSADDKHRRFADKESDFLAFVNLWHFIQTQQKELSKNQFRNLCRKDYLNYNRVREWQD
IYHQLRLAVREMGLKINSEAATYQPIHTALLTGLLSHIGLKDNEKMHYLGARNAHFFIFP
NSVLFKKQPKWVMAAELVETTKLWGRMVARIEPEWIEPLAVHLTKSSYSEPHWAKSKGAV
MASEKVSLFGIPIVTNRPVNYGSIDPSVSREIFIRSALVEGEWHNNYKFFKENNRLIREV
EAMEHKSRRRDILVDEQVLFEFYDQRIGTEVVSAKHFDTWWKKASKSDPELLNFEKSFLI
NDNANLASELDFPNFWYQDNLKLKLSYQFEVGKDHDGVTVHIPLPLLNQVEPDGFDWQIP
GLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGRVEPFKKPLLESLSYELRRMTGVLVE
AEQWDISQLPPHLRMTFRVVDDKGKKLQESENLDELKFALKNEVQNTLSNIADDGIEQSG
VHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQSAVGVKLFETEFEQARAMQAGLRRLLLL
NVPSPIKYLHEKLPNKAKLGLYFAPFGKVIELIDDCIACAVDKLIGEFGGFVWTEEKFNE
LHEYVRANLNDTTVDIAKQVEKCLTLAYELNKRLKGKLDFTMAFALSDIKAQIDGLIYPE
FVTKTGYQRLSDLHRYLTAIERRLDKLVVDSNTDRAKMLRIEQVQEVYKQLLSKLPKSKP
MPDEVQEIRYMIEELRVSLFAQQLGTKYPISDKRILNTINDLKK
NT seq 3915 nt   +upstreamnt  +downstreamnt
gtgatgaaaaagaatttgcgaaaaaatgaagaaaatcaaccgcttgtaaaactggaaaat
atcacaacgagcgattttcgtcgcctactcggcagattaaaaggagcagaaaatattaaa
aatgaagctaacaagcggtcagttttagacgaaattttgcaagatctaactgcttgccaa
gctcgcttttttatccgccaaacccacgcccaaaatctaaaaattgactatccggatctg
cctgtttccgctcgccgtgaggaaattttaaagctgattgctgaaaatcaagtggtcgta
attgctggtgaaaccggttcgggtaaaaccacccaattaccgaaaatgtgtttggaactc
ggacgaggcgtaaaaggattaatcggacatactcaaccccgcagaattgcagctcgatct
gtggcaacccgtattgctgaagagctgaaatcagagctgggggagactgtcggttacaaa
gtccgttttaacgatcaagtaagtgaaaacagcttagttaaactgatgacagacggtatt
ttgcttgccgaaattcaaaatgatcgttacttaaatcaatacgatacgctgattatcgac
gaagcccacgaacgttcgctgaacaacgatttcatcttgggctatttaaaacaaattctg
cataaacgccctgatctgaaagtaatcattacctcagccaccattgatgtagaacgcttt
tccaaacattttaacaatgcccctattattgaagtgtctgggcgaactttccctgttgaa
gttcgctaccgaccaattgtagaagaagaggagcaagaccaattacaaggtattttaaat
gccgttgatgagctacaatctgaaggaagaggcgatattctgatttttatgaatggcgaa
cgggaaatccgtgataccgccgaagctctacaaaagcaggagcttcgccataccgaaatt
ctgccactttacgctcgcttgtcagctacggagcaacaacgaattttccagccgagtggt
gggttaaaccgcattattttagccactaatgtagcggaaacctcactgacaatcccgaat
attaaatatgtaatcgacaccggcacggctcgtatttcccgctatagctatcgtaccaaa
gtacaacgcttaccgattgaaccgatttcccaagcttctgctaatcagcggaaagggcgt
tgtgggcgtatttcggaagggatctgcatccgtctctactcagaagaggatttcaacgct
cgtccgcaatttaccgatccggaaattttacgaaccaacctcgcgtctgtaattttgcaa
atgacctcgctcgggctgagtgatattgcatctttcccatttgtcgatgcacctgatagc
cgtcaaattcaagatgggattaggttgttggaagagttgcaagcaattattcctaaccga
aacggagctcgcctgtctacacataaattgacactaatcggtaaacagctcgctcaacta
cctgtcgatcctcgtttaggcagaatgattattgaggcatcgaaaaacggttcattgcac
gaagtaatgatgatcgtttccgctctctctatccaagatccgagagaacgcccacaggag
aaacagcagtccgcagacgataaacatcgccgctttgccgataaagagagcgatttcttg
gcatttgtaaacctttggcatttcattcaaacgcaacaaaaagagttatcgaaaaatcaa
ttccgcaatctctgccgtaaggattatttaaactataatcgtgtgcgggaatggcaggat
atttaccaccaactccgtctagccgtgcgtgaaatggggctaaaaattaacagtgaagct
gccacttatcagccgattcatactgcccttctcacagggctactctcgcatatcggtttg
aaagataatgagaaaatgcactatttaggggcaagaaatgctcacttcttcattttcccg
aattccgtgcttttcaaaaagcagccgaaatgggtaatggcagcagaactggtagaaacc
accaaactttggggacgaatggttgctcgcattgagccggaatggattgaaccattggca
gtacatttaaccaaatccagttacagcgagccacactgggcgaagtccaaaggagcggtg
atggcatctgaaaaagtgtcgctatttggcattccaattgtaacaaatcgccctgttaat
tatggctcgattgacccaagcgtcagccgtgaaatttttatccgctcagcactggtggaa
ggtgaatggcataataattacaaattttttaaagaaaataaccgcttgatccgcgaagta
gaggcaatggagcataaatcccgccgccgtgatattttagtggacgagcaggtattattc
gagttttatgatcaacgaataggtacagaggtggtgtccgccaaacactttgatacttgg
tggaaaaaggcttcgaaaagcgatcctgagctactgaactttgaaaaatcgttcttgatt
aacgataatgctaacttggcgagcgagctggatttcccgaatttctggtatcaagataat
cttaaattaaaactcagctatcaatttgaagtgggtaaagatcacgatggcgtaacggtg
catattccattgccattactcaaccaagtcgagcctgatggtttcgactggcaaattccg
gggcttcgccacgagttaattgtttctttgatcaaaagtctaccaaagtcattacgccgc
aactttgtgcctgctcctaactatgctgatgcctttttagggcgggttgagccgtttaaa
aaaccattattggaaagtttaagctatgaacttcgtcgaatgaccggcgtgttagttgag
gctgaacagtgggacatcagccagctaccgccgcatttgcgaatgaccttccgtgtggta
gacgacaaaggcaaaaaattacaagagagcgagaatttagacgagctgaaatttgctctc
aaaaatgaagtacagaatacgctttcaaatatcgctgatgacggcattgagcaaagcggt
gtgcatatttggaattttgccgagttaccgcaattctacgaacagaagaaagcccatttc
agtgtgaaagcctaccctgcgattgtcgatgaacagagtgcagtaggcgtgaaactattt
gaaacggaatttgaacaggctcgggcaatgcaggctgggttacgccgtttattgttgctc
aatgtgccttcaccaatcaaatatctacacgaaaaactaccaaataaagctaagctcggc
ttatattttgctccattcggcaaagtgatagaactgattgacgactgtatcgcctgtgca
gtggataagttgattggggaattcggcggttttgtatggactgaggagaaattcaacgaa
ctgcacgaatatgtacgagcaaatcttaatgataccactgttgatattgcaaaacaggtt
gaaaaatgtttaacgttggcgtatgagctgaataaacgcctaaaaggcaaattggatttc
acaatggcatttgcgttaagtgatattaaagcccaaattgatggattgatttatccggaa
tttgtaaccaaaaccggctatcaaagattaagcgatttacaccgctatttaaccgccatt
gaacgccgtttagataaactggtagttgatagcaatactgaccgagccaaaatgttacgc
atcgaacaagtccaagaagtctataagcaacttttaagcaaactgccaaaatctaagcca
atgcctgatgaagtgcaggaaattcgatatatgatcgaggaactacgggtcagcctattt
gctcaacagcttggtacaaagtatccgatttctgataagagaattttaaatacaattaat
gatctaaaaaaataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system