KEGG   Mizuhopecten yessoensis (Yesso scallop): 110443655
Entry
110443655         CDS       T05079                                 
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110443655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myi03021]
    110443655
   03036 Chromosome and associated proteins [BR:myi03036]
    110443655
Transcription machinery [BR:myi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110443655
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     110443655
  Chromatin remodeling factors
   BAF complex
    110443655
   PBAF complex
    110443655
   GBAF(ncBAF) complex
    110443655
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC BRK HSA Bromodomain QLQ ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 110443655
NCBI-ProteinID: XP_021343682
Position
Unknown
AA seq 1708 aa
MMATGEDKMMPGPPPPVPGYPQQNQVQDNMQMIQKAMNQMEEKGMQEDPRYATLMAMADR
ARSGMHPPGMPSSMPQGMPGGPQHHGMQGPRSQNQGQRMATSPSPGMGGHQGMPGSSHSM
PGGPPGMSGGPGMMPGGPQGMHSGQQGMPGPGGQNMGGGQPHRMGSMGPNQGMPNGSMGM
SGSSMPNPALGGPNMTAPPSGPPNMNLPQNMPNSSSSAGPNVSQPSGLHMSGGPNMGGYN
MANQGGQGMPSSTGGSPGMGAPDMNGPIPGNSTGMGNHGSSGGPMGHSMPMEDMRAMSHG
NGHSSQGPPNPRMDQDQNQQGQQNMPPNQSSGPSRYNFSTPQLTQLRGQIMAYKLLARNQ
SIPDNVRMAIDGKRQFGSGSRPMTDSNQQQRMPQQPPQPHMPPQNMHYQGGPPQGQPGQP
AQPASQPRPQSQQTPPSAVQSMLSMQQKQSRIAPVAKPQGLDPLEILNERENRISSRISS
RIKELEYLPGIMEEDMKIKAMIEFRALRLLNFQRQLRSEVVAYMRKDTTLETALNTKAYK
RSKRQSLREARVTEKLEKQQKLEHEKRRRQKHQEYLNAVLQHAKDFKEFHRNVTAKISKL
NKAVMVHHANTEREQKKEQERLEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLHQTDEY
ITNLMSLLSDHKEDIRKKKQARKKKKKKETSDNPDNADESSNMSEPRISVIETNTGKVLS
GEDAPMSSQLESWLEMHPGYEVAPREDGEEDDDEEDEEEPEEILPPPRPALNRPQIQSVD
DLAEHEATEIIKTAEQRLDDDEYHNQVEMRNYYNVAHSIHEDVMEQASIMINGTLKNYQV
KGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMESKKINGPFLIIVPLSTLSNWL
LEIEKWAPSVITVSYKGSPLTRKALSPQLKMGKFNVLLTTYEYIIKDKSVLAKIRWKYMI
IDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCTTF
EQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCE
MSALQRVVYRHMASRGILLTDGSEKDKKGKGGAKTMMNTIMQLRKICNHPFMFPHLEEAF
AEQLGLSTNVVQGAELYRAAGKFELLDRMFPKLKASGHRVLLFCQMTSLMSIMEDYFVYK
GYRYLRLDGTTKADDRGQLLSVFNCPDSPYFVFLLSTRAGGLGLNLQAADTVIIYDSDWN
PHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNVDEKVIQAGMFDNKST
GTERRQFLTTLLLQENDEAEEEDEVPDDETINQMLARTEDEFDQYQKMDIERRREEARNP
NRKPRLMEQDELPAWIVKDEAEVERLTFEDEEDKIFGRGERQRKEVDYTDSLTEKQWLKA
IEDGNLEEVEEQVKRVPPVPEKEKKKTKKRKMMVVEDDDDKKPKKKRGRPPVEKLPPNPP
KLTKMMKKLLDVIIHYKDNDGRVLSDAFFQLPSKKELPEYYEIIIKPVDFKKIKARIRDH
KYRSIDDLESEVLTLCENAQSYNIEGSLIYEDSIVLQSVFTNARERLEKDGFNVSSDESA
SSEADDDDDNGDDDDEEVVKVQKVKLKESRKEKSGSARKQRKSRGKSRPVISDDDDDAED
EDQSEEETAPSSRSSSRVSSPAPGRRQR
NT seq 5127 nt   +upstreamnt  +downstreamnt
atgatggctacaggggaagacaagatgatgcctggccccccaccacctgtaccaggttac
ccacagcagaaccaggtccaggacaacatgcaaatgattcagaaggcaatgaatcagatg
gaagaaaaagggatgcaagaagatccaagatatgcaacgctgatggcgatggctgacagg
gccagatctgggatgcacccaccaggaatgcctagtagtatgccccagggaatgccaggc
gggccacaacaccatggtatgcagggccctcgatcacaaaaccagggtcagaggatggct
acctccccttcaccaggcatgggaggtcatcaaggaatgccaggctcctctcacagcatg
cctggtgggccaccaggaatgtctggtggcccaggcatgatgcctggcggtccacaaggc
atgcactctggtcagcaaggtatgccaggcccagggggtcagaatatgggcggaggccag
ccacataggatgggaagcatgggaccaaaccaaggtatgcccaatgggtctatgggaatg
tctggttctagtatgcctaaccctgcgctgggaggaccaaatatgacagcacctccaagt
ggtccaccaaacatgaatttacctcaaaacatgccaaatagctccagcagtgcaggacca
aatgtcagtcagccatccggtctacacatgtctggtgggcctaatatgggtggatacaac
atggcaaaccagggaggacaagggatgcccagtagcactgggggatctcctggtatgggt
gcaccagatatgaatggaccaataccaggaaatagtactgggatgggaaaccatggtagt
tctggaggaccaatgggtcattctatgccaatggaggacatgagggcaatgagtcatggt
aacggccattcatcacagggtccacctaatcccaggatggaccaagaccaaaatcagcaa
ggccagcagaacatgccaccaaaccagagcagtggtccatcccgatacaacttctcaacc
ccccagcttactcaactcaggggacagatcatggcctacaaactgcttgcacgaaaccag
agcattccagataatgtacgaatggctattgatggaaaacgtcagttcgggagcggatca
agaccaatgactgattctaaccaacaacaaagaatgcctcagcaacctccacagcctcac
atgcctccacagaatatgcattaccaaggtgggccaccccagggacaacctggtcagcct
gcccagccagcctcacagccccgccctcagtctcagcaaacaccaccttcagctgtccag
tcgatgctttccatgcagcagaagcagagtcggattgcgcctgttgcaaaaccccagggg
ctggaccctttggagattctcaatgaaagagaaaacagaatttcatccagaatatcatca
agaataaaagagcttgaatatctaccaggaataatggaggaagatatgaaaatcaaagcc
atgattgagtttagagctctgagattactcaatttccaacgacagttgaggtcagaggtt
gtagcctatatgagaaaagacacaacgttggagacagcactgaacacaaaagcctataag
aggagcaagaggcagtcactgagggaggcacgggttacagaaaagctggagaagcagcag
aaactggagcatgaaaaacgacgcaggcagaaacatcaggaatatctaaatgctgtgcta
cagcatgccaaagactttaaagaattccaccgcaatgtgactgccaagataagcaaactg
aacaaagcagtgatggtgcaccatgctaatacagaaagggaacagaagaaggaacaagag
cgactcgagaaagagcgaatgaggagactcatggctgaagatgaagaaggttacaggaaa
ctcattgatcaaaagaaagacaagcgtcttgcctacctccttcaccagactgacgaatac
atcacaaacctcatgtctttgttatcggatcataaagaggatataagaaaaaagaaacaa
gcaaggaagaagaaaaagaagaaggaaacaagtgataatcctgataatgctgatgagagt
tctaacatgagtgaaccaagaatatctgtgatagaaaccaatactggtaaagttctgagt
ggggaagatgctccaatgtccagtcagcttgaatcctggttagagatgcatcccggatat
gaggtagccccaagagaagatggggaagaagatgatgatgaagaggacgaagaagagccg
gaagaaatattaccacctcctcgaccagccctcaacagacctcagatacagtcagtggat
gacttggctgaacacgaagcaacagaaattatcaaaacggcagaacaacgtctggacgac
gacgaataccataaccaggtggagatgaggaattactataatgtagctcactcgatccat
gaggatgtgatggaacaagccagcatcatgataaatggaacactgaaaaattaccaggtc
aaaggattggagtggatggtgtctttatataacaacaacttgaatggtatcctggccgat
gaaatgggtctgggcaagaccatccaaaccattggcttgatcacctatcttatggagtcc
aagaagattaatgggccattcctgatcattgtgccactctcaacgctgtccaactggctt
ttggaaatagaaaaatgggctccctctgtcatcactgtatcatacaaaggttctccactc
actcgaaaagccctatcaccacaactcaagatgggcaagttcaacgtgctgctaaccaca
tacgaatacatcatcaaggacaagtctgtgttagcaaagatacgatggaagtacatgatc
attgatgaaggacatcgtatgaagaaccaccattgtaaactgacacaggtgctaaacacc
cactacattgctccccaccgtctcttattgactggcacacctctacagaacaaacttcca
gagttgtgggccctgcttaacttcctgttgccaagtatcttcaagtcctgcactacattt
gagcaatggtttaatgcaccttttgctatgactggagaaaaggttgagttaaaccaggaa
gaaaccctccttatcatccgacgtttacacaaagtgctgcgtccattcttgcttcgtcgt
ctgaagaaagaggttgaatctcagctacctgacaaggttgagtatgtgatcaaatgtgag
atgtcagcactccaacgtgttgtatacagacacatggcgtccagaggcattttgttgact
gatgggtcagaaaaggacaaaaagggcaaaggaggtgcaaagacaatgatgaatactatc
atgcagttgagaaagatctgcaatcatcccttcatgttcccacatttagaggaggctttt
gcagaacaactaggcctgtcaaccaatgttgtgcaaggggcagagttgtaccgagctgcc
gggaagtttgagctgctggacaggatgttcccaaaactgaaggcttcaggccatcgagtg
ctgctcttctgtcagatgacctctctcatgagcatcatggaggactactttgtctacaaa
ggttaccgataccttcgtctcgatggtacgactaaggcagacgacagaggccagctccta
agtgtgttcaattgtcccgactccccctactttgttttcttactgagtacaagggctgga
gggctgggcttgaacctccaggctgctgatactgttatcatatacgactctgactggaat
cctcatcaggacttgcaagctcaagacagagctcacagaatcggtcagcagaatgaagta
cgtgtgctgcgtcttatgaccgtgaacagtgtggaggagaggatcctggctgctgcacga
tataagttaaatgtggacgagaaggtcatccaggctggtatgtttgacaacaagtcaaca
ggaacagagagacgccaatttttaacaacactgctcttgcaagagaatgatgaagctgag
gaggaagatgaggtacctgatgatgaaacaatcaatcagatgttggcgagaactgaggat
gaatttgatcaatatcagaaaatggatatagagagaagacgagaggaagctagaaatccc
aatagaaaaccccgactcatggaacaggatgaactgccagcctggatagtcaaggatgaa
gctgaggttgagagactgacctttgaagatgaagaagacaagatatttgggcgcggagaa
agacaaaggaaggaagtggactacaccgactctctcacagagaaacaatggctcaaggct
atagaagatggtaacttagaggaggttgaggagcaggtgaagagagttccaccagtcccg
gagaaggagaagaagaaaactaagaaacgaaagatgatggtggtggaggacgatgatgac
aagaaaccgaagaaaaagagaggacgaccaccagttgaaaagctgcccccaaacccaccc
aaactcacaaagatgatgaagaaacttcttgatgtcatcattcattacaaagacaatgat
ggaagagtcttgagtgatgccttctttcagctgccatccaaaaaagaactaccagaatac
tacgagatcataatcaaaccagttgactttaaaaagataaaggcacgtatcagggaccac
aaatacaggagtattgatgaccttgaatctgaagttcttaccctgtgtgaaaatgcacag
tcctacaacattgagggatcactgatctatgaggattcaattgtgctccagtccgtgttt
accaatgcaagagagagactggaaaaggatggatttaatgtttcttctgatgaaagtgcc
agcagtgaggcagatgatgatgatgataatggagacgatgatgacgaagaagtggtaaaa
gttcagaaagtgaagttaaaggaatcaaggaaggagaagtcaggtagtgctaggaaacaa
cgcaaatctagaggaaagtcacggcccgtaatcagtgatgatgatgacgatgcagaggat
gaggaccaatcagaagaagagactgccccaagttcacgcagttcatcaagagtttcctca
cctgctcccggtcgcagacaacgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (119)   
   KEGG ORTHOLOGY (1)   
   RefGene (115)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (138)   

Download RDF
DBGET integrated database retrieval system