KEGG   Mizuhopecten yessoensis (Yesso scallop): 110460513
Entry
110460513         CDS       T05079                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
  KO
K12646  ATP-dependent RNA helicase DDX58 [EC:3.6.4.13]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:myi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:myi04054]
    110460513
Enzymes [BR:myi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     110460513
Pattern recognition receptors [BR:myi04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   110460513
SSDB
Motif
Pfam: DEAD CARD_2 RIG-I_C ResIII Helicase_C CARD RIG-I_C-RD AAA_19 zf-TFIIB
Other DBs
NCBI-GeneID: 110460513
NCBI-ProteinID: XP_021369135
Position
Unknown
AA seq 1023 aa
MATNTNDDEHLQEKIDVYRLVLMECVIPTELLPSLTDVLSGPDASTIKNLTRQSSDRAGT
EHLLNVLVEKTEIRGRWRMLVNALKQHGYGTLSMILEGKMDLIDRDRNKRIIEIFMLPLQ
KIMKPLDILPSLIQKGVLSREDDENIEAEHRNHGMLAASALLLDRIYRKKSNWYDMFLQS
LAENDFGHLAEKIDPDFMKKWAIRNEEVIYQRGEPPDSSTMENYQSDDGEAMTDLKGLNL
SPNHQRDHTHDTNDTKKEENLNSTAKDSAGEEALTKLKQVQQTARQPTEHDELSGTCAES
SPMASNDQSEPVASVPPSIAVQDSSETIGSDLSLYRYQEELAKPGLEGHNSIVIAPTNSG
KTHVAIRIMQHHLRRGQGKVIFLVPTSALATQQRDRCHELLKCPVKVMTGESQAREKYID
MSVHLKNHDVIVATPQILVNCLLAKEDVTLQTFSLIVFDECHRTYEDTPYNAVMRIYWDE
KFTSAYVRLPQILGMTASLGSGQANSQSSANTWVKNIMANMDSQKLVTVKENIKELEENI
NNTDTEIIETKERRNKSFGNLVNDMMATIEGTINRLEGELKRPPTLRSGAQYTQWCSTLR
KQVTSLSTVDNDLHRSLKIYADYLEVYHRALLIYQDARVSDAVRYLKEELDEMYFEETAV
EADREMYGLFQEKQQLMENHDDGDQENPKLHEVQVRICTLFRDDPDSRAIIYVKTIELAR
SMEAWMNECPELQSLKAVRFVGAHAKVGIGGITKMEQDTILKAFRNGDHKVVIGTSVLEE
GLDVPRCNLVILYDHVTNEIQRVQTRGRIRRDNSHFVLIVSESGQAAQKELVNERREDMS
SEAIRLVQDEISRDPQAFYEKQQDQQREEKRKRDAVVLDEQKQLENNPVYEVKCNHCRGL
LFLSSDLRKIKVHHTVVARGMKDTLSPGPRGKPSFVDRDMEHGIAELYCKTCQIFIGSVN
KSMSLFFPMPRIDQITFSRDDVYKTCKKWKDVKKLFGIKTFCPIEDMRFILALPAEERDF
YTS
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggccacaaacacgaacgacgatgaacacttgcaagaaaaaatagacgtatatcggctt
gtgctgatggagtgtgtaatcccaacggaattactcccatcgttaaccgacgtgctgtca
ggtccagacgcttcaacaatcaaaaacttgactcgtcagagcagtgacagggctggtaca
gagcacctgttaaacgtcttggtagaaaagacggagatccgggggcgatggcggatgtta
gtgaatgcgctgaaacaacacggttatggaactctctcaatgattctagagggaaagatg
gatctgattgacagagaccgcaacaagagaatcatagagatatttatgttgccactgcaa
aagatcatgaaaccgctagatattcttccttcactgatacagaagggcgtgttgagtcgc
gaggatgatgagaatatcgaagccgaacatcgcaatcatggaatgctggctgcatcagcg
cttttactagatcgtatttaccgaaagaagtcaaattggtatgacatgtttctacagtct
cttgctgaaaacgacttcggtcacttggctgagaaaattgacccagacttcatgaagaag
tgggcgattcggaatgaagaagttatatatcagagaggagaaccacctgattcatcgaca
atggaaaactatcagtcagatgatggggaagccatgactgatctaaaaggtttgaatttg
tcaccaaatcaccaacgtgatcacacgcacgataccaatgacaccaaaaaagaagaaaac
cttaattctacggctaaggattccgctggtgaagaagcattgacaaaattgaaacaggtc
cagcagacagctagacaaccaacagagcatgacgagttatctggaacatgtgcagagtca
tctcctatggcaagcaatgatcagtcagaaccagtggcttccgtaccacccagtatcgcg
gtacaggattctagtgagaccattggatcagacctatcactatacagatatcaggaagag
ctggccaaacccggattagagggacataactctatagtcattgctccaactaacagtggc
aagacgcacgtggccatcaggatcatgcagcaccacctgaggagaggtcagggtaaggtg
atattcctggtgccgacctcggctttggcaacacaacagcgggataggtgtcacgaactg
ttaaaatgtccggtcaaggtgatgacgggggaaagccaagcaagagaaaaatatattgac
atgtcagttcacctgaaaaatcacgatgtgattgtggctacgccgcagatacttgttaac
tgtctgttggcaaaagaagatgttaccctgcaaacgttttctctcattgtgttcgatgag
tgtcacagaacgtacgaggatacaccttacaacgcagtgatgcgaatctactgggacgag
aagtttacaagtgcatatgttcgtcttccgcagattttgggaatgacagcttcactagga
tcaggtcaggctaactctcagtcatcggctaacacatgggtcaaaaacattatggccaac
atggactctcaaaaactggtgactgtaaaggaaaacatcaaggagctagaagaaaatatc
aataacacagatacggagattatagagacaaaagagcgacgtaacaagtcgtttggcaac
cttgtcaacgatatgatggcgaccatagaagggactataaaccgcttggagggcgagcta
aaacgacctcctacattgcggagtggcgctcagtacacgcaatggtgtagtacgctgaga
aaacaggtgacaagcttaagtaccgtggacaacgaccttcacaggagcctgaagatatat
gccgactacttagaggtgtaccatcgcgccctcctaatataccaggatgcacgtgtcagt
gacgcagtccggtatctcaaggaggagttagatgagatgtatttcgaggagacggctgta
gaggctgatcgtgagatgtatggtctgtttcaagagaagcagcagctgatggaaaaccat
gatgacggtgatcaggagaaccccaagctgcacgaagtccaggttcggatttgtacttta
tttcgtgacgaccctgattctagagccatcatatatgttaaaacgatagagcttgccaga
tcgatggaggcctggatgaatgagtgcccggagcttcaatctctaaaagcggtgcgcttt
gtaggtgcacatgctaaggttggaatcggaggtataaccaagatggaacaagatacaatc
ttgaaggcgttccggaatggcgatcacaaggttgttattggtacctctgtgttagaggag
ggattggacgtgcctagatgtaatctggtcatcctttacgatcacgttaccaacgaaata
cagcgtgttcagacgagaggacgcataaggagagacaatagccacttcgttctcatagta
tctgaatcagggcaagcagcacagaaagaacttgtaaacgagcgaagagaggacatgagt
tcggaagccatacgtttagtccaggacgagatttctagagacccgcaggccttctacgaa
aagcagcaggaccagcagcgagaagagaagcggaaacgagacgcggttgttttagatgaa
caaaagcaactggagaacaaccctgtgtacgaggtgaaatgtaaccactgcagaggtttg
ttgtttttgtcgtcagatcttcgcaagattaaggttcatcacaccgtcgtggccagaggc
atgaaggacaccctgagtcctggtccgcgtggaaaaccgtcatttgtagatagggacatg
gagcatggcattgcagaactttattgtaagacgtgtcagatattcattgggtctgttaac
aagtccatgtcactgttcttccccatgcctcgaatcgatcagatcacattttcaagagat
gatgtctacaaaacatgcaagaaatggaaagatgtcaaaaaactctttggtattaaaaca
ttttgtcctattgaggatatgcggtttattttagcacttcctgctgaggaaagagacttc
tatacctcataa

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