KEGG   Mizuhopecten yessoensis (Yesso scallop): 110464055
Entry
110464055         CDS       T05079                                 
Name
(RefSeq) nuclear pore complex protein Nup88-like
  KO
K14318  nuclear pore complex protein Nup88
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110464055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myi03019]
    110464055
Messenger RNA biogenesis [BR:myi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110464055
SSDB
Motif
Pfam: Nup88 CCDC-167 TelA Ac81 Transcrip_act IFT57 FapA
Other DBs
NCBI-GeneID: 110464055
NCBI-ProteinID: XP_021374747
Position
Unknown
AA seq 633 aa
MAGVDNWRTCLNDQPFCKQLRENNAKDSRQKRCSTSKGLTAVQGGDLYVWDSFASHLVFY
NLKNLLPECADRERNQAQILLCSNAPRFDVEFLTFNPSGSLVALWGQSGITVLELPKRWG
RYAELEGGKPSITCKSVSIASHFFASHKGAGLQQVLWHPGSESDTHLTFLMSNGILSVYN
VQFPDIPTQVIHLDSHGADLSQTTSCISVATALGERTMGFDFGPSIQLSRRASLSQSSLY
SQTDSITVWPAYIVKGNGDMLVAYTDLHSGSPVKLPPQGPLLMHPPAEDNYGVDACAVCC
LGEAPTVLVIATCEGKLHHCIVLPSSSPEYQGDNDWSTSAGSTGQFEGAPDVSLYVYESV
ELELTLTMADGDLEEELTCPIRLLKDAVNSDWYHCCHAAGIHTVILPWLSNLQTFCFDDG
ADLQDLPEQQECIVEHLICTKPLPSSPPSPVLGVGVVREADLGTSLLALTSDIDFVSLPL
SFRVRILTELKQQQQQDLGDLEISRTRLHESAQELAIRYDDCQEAHDSILRRIESVMRRL
QARNPVLSEAERGMKKDLETMEEQLDNYRKSLHQLRTKHEYQTRQMKKSQGASASHTLKN
SQVSQIRTVLQQDGEDLTSMLHRINQLKLDAGV
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggcgggtgttgacaattggcgcacatgtttgaatgaccagccgttttgtaaacaattg
cgtgaaaataatgcaaaggattccagacagaaacgctgcagtacatcaaagggactcact
gctgtccagggtggagatttatatgtctgggatagctttgcatcccacctcgtcttctac
aatctcaagaatcttctgccagagtgtgcagatcgcgagaggaatcaggcgcagatcctc
ctgtgttccaacgccccgaggttcgatgtggagtttttgacctttaaccccagtggcagt
ctagtagccttatggggacagagtggaatcacggttcttgaactccccaaacgttggggg
cgttacgcagaactagaggggggcaaaccgtccataacctgcaagtctgttagtattgcc
agccatttctttgccagtcacaagggagcagggctacaacaggtcctgtggcatcctggg
agtgaatctgacacacacttgactttcctcatgtcaaatggtatactcagtgtgtataac
gtacagttcccagacatccctacacaggtgatacaccttgacagtcacggagcagacctg
agccagacaaccagctgcatttccgtggcaacagcactaggggagagaactatggggttt
gactttgggccctcaatacagctcagtcgacgggcatcgctctctcagtcatccctgtat
tcacagaccgacagcatcacagtgtggcctgcctacatcgtcaagggcaacggggacatg
ctggtggcctacacagacttacacagtggaagcccagtaaagcttccgccccaggggcct
ctactgatgcaccccccagctgaagacaactatggtgtggatgcctgtgctgtgtgctgt
ttgggcgaggctccgactgtactagttattgcaacgtgtgagggcaaacttcatcactgt
attgttttaccatccagttcacctgaatatcagggtgataatgactggtcaacatcggcg
ggcagtactggtcagtttgagggagccccagacgtgtccctttacgtgtatgaaagtgtg
gagctggaattaaccttgaccatggctgatggagacttggaggaggaattaacttgtcca
attagacttcttaaggatgcggtcaattctgattggtaccactgttgtcacgcggcggga
atccacactgtcattctgccctggctcagcaacctacagacattctgtttcgacgacgga
gcagatttacaggatctccctgaacagcaggaatgtatagtggaacacctgatatgtaca
aaacccttaccatccagtcctccgtcccccgtgcttggagtgggtgtggtcagagaggct
gatcttggcacgtctctacttgccttaactagcgacatcgactttgtgtccctacctctc
agtttcagggtgaggatccttacggagctaaaacagcagcagcagcaagacctgggtgac
cttgagatttcacgtacccgtctccatgagtccgctcaggagctggccatccgctacgat
gactgtcaggaagcacatgactccattcttcgcaggattgaatctgtgatgcgacgatta
caggcccgcaaccctgtgctgtcggaggcggagcgagggatgaagaaagatttggagacc
atggaggaacagctagataattacagaaaaagtctccatcagctgcggacgaagcatgaa
tatcagacacgacagatgaaaaagagccagggggcgtcggccagccacacgctgaaaaac
tcgcaggtgtcccagatccgtactgtactacagcaggatggtgaagatctcaccagcatg
ctgcacaggatcaaccaacttaagttagacgctggggtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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