KEGG   Mycolicibacterium neoaurum NRRL B-3805: MyAD_17120
Entry
MyAD_17120        CDS       T05013                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
myn  Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03030  DNA replication
myn03410  Base excision repair
myn03420  Nucleotide excision repair
myn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:myn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MyAD_17120
   03410 Base excision repair
    MyAD_17120
   03420 Nucleotide excision repair
    MyAD_17120
   03440 Homologous recombination
    MyAD_17120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myn03032]
    MyAD_17120
   03400 DNA repair and recombination proteins [BR:myn03400]
    MyAD_17120
Enzymes [BR:myn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MyAD_17120
DNA replication proteins [BR:myn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MyAD_17120
DNA repair and recombination proteins [BR:myn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MyAD_17120
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MyAD_17120
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 DNA_pol_A_exo1 CNV-Replicase_N DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AMO06614
Position
complement(3652803..3655541)
AA seq 912 aa
MSPAKTESTAKNPAGDASTDGQKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYG
FTAMLINLLRDEQPSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGA
LGITVLAEPGFEADDIIATLATQAEDAGYRVLVVTGDRDSLQLVSDDVTILYPVKGVSEL
TRFTPEAVAAKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEHGSLQGLVDN
VDKVKGKVGDALRANLSSVVLNRELTELVKNVPLPHTPDTLRMLPWDRDQIHRLFDDLEF
RVLRDRLFDTLASADPEVDQGFDVRGGALAPGELAAWLAEHSLGNRFGVAVVGTHLAFDS
DATALAIVANDGDGRYIDTATIHPDDEAALAAWLADPGPPKALHEAKLAMHDLEGRGWKL
AGVTSDTALAAYLVRPGQRSFALDDLSLRYLKRELRAENPEQQQLSLLDDNEGVDEQAVQ
AVLLRAAAVMDLADALDEELARIDSSSLLERMELPVQRVLAELESTGIAVDVDFLRGLQN
EFGDYIRDAAEAAYAVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDADALQGLF
DKTGHPFLQHLLAHRDATRLKVTVDGLLASTAADGRIHTTFNQTIAATGRLSSTEPNLQN
IPIRTEAGRRIRDGFVVGEGYTELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFV
ASRAFDVPIDEVTPELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKEQMDQYFDRFGG
IRDYLRDVVDQARKDGYTSTVLGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIK
VAMINVDQAIKSAGLTSRMLLQVHDELLFEVSEGERGELEKLVREHMGNAYPLDVPLEVS
VGFGRSWDAAAH
NT seq 2739 nt   +upstreamnt  +downstreamnt
gtgagccccgcgaagaccgagagcaccgccaagaatccggccggcgacgcgtcgaccgat
ggtcagaagccgaccctgatgctgttggacggcaactcgctggccttccgtgctttctat
gcgctgcccgccgagaacttcaagacccagggcggtctgaccaccaatgcggtctacgga
ttcaccgcgatgctgatcaacctgctccgcgacgagcaacccagccatatcgccgccgcg
ttcgacgtctcccggcagaccttccgcaaggagaagtacccggagtacaaggagggccgc
tcggccactcccgacgagttccgcgggcagatcgacatcaccaaggaggtgctcggtgcg
ctgggcatcaccgtgctggccgagcccggattcgaggccgacgacatcatcgccaccttg
gccacccaggccgaggacgccgggtaccgggtgctggtcgtcaccggagaccgggactca
ctgcagttggtgagtgacgatgtcaccatcctgtacccggtgaagggcgtcagtgaactg
acccggttcaccccggaagcggtggcggcgaagtacggcctcactcccgcgcagtacccg
gatttcgccgcgctgcgcggcgatccgagtgacaacctgccgggcatcccgggggtgggg
gagaagaccgcgaccaagtggatcgtcgagcacggctccctgcagggtctggtcgacaac
gtggacaaggtcaagggcaaggtcggcgacgcgctgcgcgccaacctgtcctcggtggtg
ctcaaccgggagctcaccgagctggtcaagaacgtgccactgccgcacaccccggacacc
ctgcggatgctgccctgggaccgcgatcagatccaccggctgttcgacgacctggagttc
cgggtgctgcgcgatcggctcttcgacacgctggcctcggcggacccggaggtcgaccag
ggtttcgacgtgcggggcggggcgttggcgcccggcgagctggcggcctggctggccgag
cacagcctgggcaaccggttcggtgtcgccgtggtcggtacgcacctggccttcgacagt
gatgccaccgcgctggcgatcgtcgccaacgacggtgacgggcgctatatcgacaccgcg
acgatccatcccgatgacgaagccgccctggcggcctggctggccgacccgggcccgccg
aaggcgctgcacgaggccaagctcgccatgcacgacctggagggtcgcggctggaagctg
gccggcgtcacctccgataccgcgctggccgcctacctggtgcggccgggccagcgcagc
ttcgcactcgatgacctgtcgctgcgctatctcaagcgcgagctgcgcgccgaaaacccc
gagcaacaacagctttcgctgctcgatgacaacgagggcgtggacgagcaggccgtgcag
gcagtgctgctgcgggcggcagcggtgatggacctggccgatgcgctcgacgaagagctg
gcccggatcgactcttcctcgctgctggaacgcatggagctgccggtgcagcgggtgctc
gccgaactggagagcaccgggatcgcggtcgacgtggacttcctgcgcgggctgcagaac
gagttcggcgactacatccgcgacgcggccgaggctgcctacgcggtgatcggcaagcag
atcaacctcgggtcgcccaagcagctgcaggtcgtgctgttcgacgagctcgagatgccc
aagacgaagaagaccaagaccggctacaccaccgatgccgatgcgctgcaggggcttttc
gacaagaccgggcatccgttcctgcagcacctgctggcccatcgggatgccacccggctc
aaggtcaccgtcgacggactgttggcatcgacggccgcagacggccgaattcacaccacg
ttcaaccagaccatcgcggccaccggccggctctcgtcgaccgagccgaacctgcagaac
atcccgatccgcaccgaggccggccgtcggatccgcgacgggtttgtcgtgggcgagggt
tacaccgaactgatgacggccgattacagccagatcgagatgcgcatcatggcgcatctg
tcgcgggacgagggcctgatcgaggcgttcaacaccggtgaggatctgcactcgttcgtc
gcgtcacgggccttcgacgtgccgatcgatgaggtcaccccggagctgcgccgccgggtc
aaggcgatgtcctacggcctggcctacgggctgagcgcctacggtctctcggcgcagctg
aagatcagcaccgaagaggccaaagaacagatggaccagtacttcgaccggttcggcggc
atccgcgactacctgcgtgatgtggtcgaccaggcccgcaaggacggttacacctccacg
gtgctgggccgccgccgctacctgcccgaactggacagcagcaaccgcaatgtccgggag
gcggccgagcgggccgcgctcaacgccccgatccagggcagcgccgccgacatcatcaag
gtggccatgatcaacgtcgaccaggccatcaaatcggccgggctgacatcccggatgctg
ctgcaggtgcacgacgagctgctgttcgaggtctcagaaggggaacggggggagctcgag
aagctggtgcgcgaacacatgggcaacgcctacccgctcgacgtgccgctggaggtttcg
gtcggcttcggacgcagctgggacgccgcggcgcactag

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