KEGG   Myroides sp. A21: MYRA21_3380
Entry
MYRA21_3380       CDS       T03521                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
myr  Myroides sp. A21
Pathway
myr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:myr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYRA21_3380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myr03019]
    MYRA21_3380
Enzymes [BR:myr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MYRA21_3380
Messenger RNA biogenesis [BR:myr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MYRA21_3380
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 AAA_22 CMS1 P-loop_SecA ERCC3_RAD25_C Stn1_C
Other DBs
NCBI-ProteinID: AJA70473
Position
3698528..3699640
AA seq 370 aa
MNFKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGKDVIGTAQTGTGKTAAFAIPIL
QKLHSTPKSTKGIRALILVPTRELAIQVKDSFLDYSTELPLKTVTLFGGVPLPPQVRALK
QHPEIIVATPGRLLDLINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKRQS
LFFSATMPKEIEQFARTIVYKPVKIEVAAEVITATTIEQQVYYTEKKDKKTLLHTILKEN
TESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIATDI
AARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQRKELKDIQRFT
GIKMQVKQEI
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaactttaaagatttagcattaacacaagagatacaaacagcattaactaaaataggt
tattctacagctactgaaatacaacaaaaagcaatccctcctattctggaaggaaaagat
gtaatcggtactgctcaaacaggtacaggtaaaactgctgcttttgctattcctatttta
caaaaactgcactctactcctaaatcgacaaaaggtataagagccttaattttagttcct
acaagagaattagcaatacaggtaaaagatagttttttagactatagtactgagcttcct
ctgaaaacagtaactttattcggtggtgtacctcttccacctcaagtaagagcgttaaaa
caacatcccgaaattatcgtggctactcctggtcgactattggatctaatcaatcaaaaa
atagtaaagctttctaatctagagatattagtactagatgaggctgatcagatgttagat
atgggattcatacacgatcttaaaaaaattcttaaatttgttcctactaaaagacaatct
ctgttcttctcagctacaatgcctaaagaaatagagcaattcgctagaacaatcgtctac
aaacctgtaaaaatagaagtagctgctgaagtaatcacagcgacaactatcgaacagcaa
gtatactatacagagaagaaagataagaaaacgttattacacactatcttaaaggagaat
acggagtctacattagtatttacaagaacgaaatacgaggctaataacctagttaaatac
cttcaaaaggtcaatatggtggcgatggctatccatggaaataaatctcaaagtgctcgt
gttaaagcattagatgattttaaaaataagaaaatcaatatccttatcgcaacagatatt
gctgcaagaggaatagatataagcaaacttccctttgtgatcaactatgatataccagac
aaaccagagacttacgttcatcgtatcggtcgtactggacgagctggagtacaaggggtt
gccatgtgtttttgcacacctgaacaacgaaaagagctgaaggatattcagcgatttaca
ggtatcaaaatgcaggtaaaacaagaaatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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