KEGG   Methylorubrum zatmanii: B2G69_21350
Entry
B2G69_21350       CDS       T04981                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mza  Methylorubrum zatmanii
Pathway
mza03410  Base excision repair
mza03430  Mismatch repair
mza03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mza00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B2G69_21350
   03430 Mismatch repair
    B2G69_21350
   03440 Homologous recombination
    B2G69_21350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mza03400]
    B2G69_21350
DNA repair and recombination proteins [BR:mza03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B2G69_21350
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B2G69_21350
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B2G69_21350
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB ATPgrasp_N
Other DBs
NCBI-ProteinID: ARO56434
Position
4631866..4633701
AA seq 611 aa
MVARVTAAMLIDPSSDLPRPFLDVTASALGRPWRERCGDPGLQALAVTMTQAYGLPDLLA
RVLVGRGVRPAEADAYLAPRLRDLMPDPSVLVDMEAAVERLAHAVRAREAVAIFGDYDVD
GASSVALLADYLRALGVPVRSHIPDRITEGYGPNVGAVTMLREEGAGLLVCVDCGTAGHE
PLAAAAALGLDVIVLDHHGAPEELPQTRALVNPNRLDDLSGLGHLCAAGVVFMTLVALAR
RLRRDGVFATSAEPRLTDFLDLVALATVADVVPLTGLNRAFVVQGLAVMRGRGRPGLAAL
LDAAGLSEPPEAWHLGFLVGPRINAGGRIGDAGLGARLLTTADPMEARRIADELDRLNRE
RQAIEAQAVAEAEAEMDAHLTRDPDRPVLIAASPEWHPGIVGLIAARLKERFGRPAFAFA
VKPDGSAVGSGRSVVGADLGGAVRGAVEAGLAVKGGGHAMAAGVTLPPGGLAAFGESLTH
DLVEAVGRARAAEALLIDGTVSAGGATAELVRLIQRAGPFGQGAPEPVMALPRHRIVDAG
IVGNGHVRARLVSGDGQAVGAIAFRAAQGPLGVALLGGIGRSFHVAGTLSCDRWRGAERA
QVRICDVAPCG
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggtcgcccgcgtgaccgccgccatgctcatcgatccgtcctcggacctcccgcgtccg
ttcctcgacgtcaccgcctcggcgctcgggcggccgtggcgcgagcgctgcggcgatccc
ggcctccaagcgctcgccgtgacgatgacgcaggcctatggcctgccggatctgctcgcg
cgcgtcctcgtcgggcgcggcgtgcggccggcggaggcggacgcctacctcgccccgcgc
ctgcgcgacctgatgccggacccgtccgtgctcgtggatatggaagcggcggtcgagcgg
ctggcccatgccgtgcgcgcccgcgaagcggtggcgatcttcggcgattacgacgtcgac
ggcgcgtcgagcgtggccctgctcgccgactatctccgggcgctcggtgtgccggtgcgc
agccatattcccgaccgcatcacggaagggtacggccccaatgtcggcgccgtcacgatg
ctgcgcgaggagggcgcgggcctgctcgtctgcgtcgattgcggcaccgccggccacgag
ccgctggccgcggccgcggcgctgggcctcgacgtgatcgtgctcgaccaccacggtgcg
ccggaggagcttccgcagacgcgggccctagtcaatccgaaccgtctcgacgacctgtcc
ggcctcggccatctctgcgcggcgggcgtcgtcttcatgaccctcgtcgcgctcgcccgt
cggctgcggcgggacggcgtcttcgcaacatccgctgagccgcgcctcaccgacttcctc
gatctcgtggcgctagccaccgtcgccgacgtggtgccgctcaccggtctcaaccgggcc
ttcgtcgtccagggactcgcggtgatgcgcgggcgcgggcgtccgggattggcagcgctg
ctcgacgcagccgggctgagcgaaccgccggaagcgtggcatctcggctttctcgtcggg
ccgcgcatcaatgccggcgggcggatcggcgatgccggtctcggcgcgcggctgctcacc
accgccgacccgatggaagcccgtcgcatcgccgacgaactcgatcgactcaaccgtgag
cggcaggccatcgaggcgcaggcggtcgccgaggccgaggccgagatggatgcccacctg
acccgcgatccggaccgtccggtcctgatcgccgcctcgcccgaatggcatcccggcatc
gtcggcctcatcgccgcccggctcaaggagcggtttggccggccggccttcgccttcgcg
gtcaagcccgacggcagtgccgtcggctccggtcgttcggtcgtcggggcggatctcggc
ggtgccgtgcgcggcgcggtcgaggcggggctcgcggtgaagggcggcgggcatgccatg
gccgcgggcgtgaccctcccgcccggaggcctcgccgccttcggggagagcctcacccac
gatctcgtcgaggccgtcggccgggcccgtgccgccgaggcgttgctgatcgacggcacc
gtgagtgccggaggcgcgaccgccgaactggtgcgcctgatccagcgggccggaccgttc
ggacagggggcgcccgagccggtgatggccttgccccgccaccgcatcgtcgatgccggc
atcgtcggcaacgggcatgtccgcgcccgcctcgtcagcggtgacgggcaagcggtcggc
gcgatcgccttccgtgccgcgcagggtccgttgggcgtcgccctgctcggcgggatcggg
cggagcttccacgtggcgggaaccctgtcgtgcgaccgctggcgcggggcggagcgggcc
caggtccgaatctgcgacgtggcgccctgtggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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