KEGG   Maylandia zebra (zebra mbuna): 101465805
Entry
101465805         CDS       T02814                                 
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101465805 (ddx41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mze03041]
    101465805 (ddx41)
Enzymes [BR:mze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101465805 (ddx41)
Spliceosome [BR:mze03041]
 Complex C
  Other components
   Complex C specific factors
    101465805 (ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC UTP25 SecA_DEAD ERCC3_RAD25_C AAA_22 Toprim
Other DBs
NCBI-GeneID: 101465805
NCBI-ProteinID: XP_004541086
UniProt: A0A3P9BUH8
Position
LG2:complement(20584689..20593174)
AA seq 614 aa
METENRPQKRSHDEDERTGSEGSEDDDYVPYVPVKIRKQQMLQKMLRLRGKAVDEEQKDS
GEEQRDEDEALGPRSHISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMS
VKEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGDGIPAPIKSFREMKL
PPAILKGLKKKGIIHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEK
RLPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQME
VVKHGVHMMVATPGRLMDLLQKKMVGLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQ
RQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECL
QKTSPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA
TDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDL
KALLVEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTN
IGRKDYLAHSSMDF
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagaccgaaaaccgacctcaaaagagatcccatgacgaggatgaaaggactggctca
gaaggatcggaggatgacgactacgttccatatgttccagtcaaaatcagaaaacagcaa
atgctacaaaagatgttgcgcttgcgagggaaagcggtggatgaagaacagaaggacagt
ggggaggaacagagggatgaagatgaggctcttggtccacgctcccatattagtctcctc
gaccagcatcaacacctcaaggaaaaggcagaagctcggaaggagtcagccaaagagaag
cagctgaaagaggaggagaagatcctggagagtgttgcagagggcagagctctgatgtct
gtgaaggaaatggccaaaggtatcatatatgatgatcctataaaaacaagctggaaagca
ccacgctacatcctgaatatgccagacaccagacatgagcgcgtcaggaagaaatttcac
atcctggttgatggcgacggcattccagctcctatcaaaagcttcagagagatgaagctt
ccaccagcaattctgaaaggtttgaaaaagaagggaatcatccacccaacaccaattcaa
atacaaggaatcccaacagttctttcaggtagagacatgattggaatcgccttcactgga
tcaggaaagactttggtcttcactctgccgatcatcatgttcgcgctggagcaagagaaa
agactgcctttctttaagagagagggaccgtatggacttatcatctgtccttcacgagag
ctggcgaggcagacacatggcatcatagagtattactgcaagctgctggaggaggaggga
gctcctcagctgcgcacagccctctgcatcggaggaatgtctgtcaaggagcagatggag
gtagtaaaacacggcgtccatatgatggttgctacacctggaagattgatggacttgctg
cagaagaagatggtgggtctggacatctgtcgctacttggctttggatgaagctgacagg
atgatagatatgggttttgaagaagacatccgaaccatcttctcttacttcaagggtcaa
agacaaaccctgcttttcagtgccactatgcccaagaaaatccagaactttgccaagagt
gcactagtcaaacccattactattaacgtgggcagagcaggagctgccagcttggatgtc
atccaggaagtggagtacgtcaaagaagaggctaagatggtgtacctcttagagtgtctc
cagaaaacgtctcctccagtgctgatatttgctgagaaaaaggcggatgtagatgccatc
catgagtatctgctgcttaaaggagtagaggcagtggccatacatggtggaaaagatcaa
gaggaaagaacaaaagccattgaagcattcaaagaaggaaaaaaagatgtgttagtggcc
actgatgttgcctccaagggtctggatttcccagctattcagcatgtagtgaactatgac
atgccagaagagatagaaaactatgtccatagaataggaagaactggacgatcgggcaaa
actggaattgccacaactttcatcaataaaggctgcgatgaatccgttctgatggatctg
aaagctctgcttgttgaagccaagcagaaagttcctccagtcctccaggtactccagacc
ggagacgagaccatgctggacatcggaggcgagagaggatgtacattctgtggtggtctt
ggtcatcgtattacagactgtcccaagctggaggccatgcagaccaagcaggtcaccaac
attggaaggaaagactacctggctcatagctcaatggacttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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