KEGG   Maylandia zebra (zebra mbuna): 101476640
Entry
101476640         CDS       T02814                                 
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101476640 (gspt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101476640 (gspt1)
   03012 Translation factors [BR:mze03012]
    101476640 (gspt1)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     101476640 (gspt1)
Translation factors [BR:mze03012]
 Eukaryotic type
  Release factors
   101476640 (gspt1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 PAM2 MMR_HSR1
Other DBs
NCBI-GeneID: 101476640
NCBI-ProteinID: XP_004557678
Position
LG8:5820627..5831465
AA seq 587 aa
MDTRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGTPDPAASMEVSETVAPVENGSTEADMPTEEETWEQKEEPGGDEGGGGQEDLGSG
ETCAEEGGAAGKEDEEMMEEEEEEMLLPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGG
QIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKK
HFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGV
KHLIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDP
VSECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQL
VMMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRT
FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQV
CIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggacacgagagacacagccccggattcgtgggagctggaagaggatgccgaggcccct
gctgccgcggcgggactcccaaccgccttcgccgcccttaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccaagcttccttcaagccagcgctgtggaa
atgccggcttcagatggtacccctgatccagctgccagtatggaggtgtcagaaacagtc
gctccagtggagaatggaagcacagaggcagacatgcccacagaggaagagacgtgggag
cagaaggaggagcccgggggagacgaaggaggtggcggacaggaggatctggggtctggg
gagacctgcgcggaggagggaggcgcagcagggaaagaggacgaggagatgatggaggag
gaagaggaggagatgctcctgcccaaagtggctccggcgccaccagacgctcctaagaaa
gaacacgttaacgtggtcttcattggtcatgttgatgccgggaaatcgacgatcggagga
cagatcatgtacttaactggaatggtggacaaacgaaccctggagaaatatgaaagagaa
gcgaaagaaaaaaacagggagacatggtacctgtcgtgggctctggatacaaatcaggag
gagagagacaaagggaagacggtcgaggttggaagagcttacttcgagacggagaaaaaa
cacttcaccatcctcgatgcccccggacacaagagctttgtccccaacatgatcggtggg
gcgtcacaagctgacctagcagtcctggtgatttcggcaagaaagggcgagtttgagacg
ggattcgaaaagggtgggcagacgcgggagcatgccatgctggctaaaacggcaggagtt
aaacatctcattgtcctcatcaacaagatggatgaccccactgtcaactggagcctagaa
aggtatgaggagtgtaaggagaagctggtgccatttctaaagaaggtgggcttcaaccct
aagaaggacatccactttatgccttgctctggactcacaggtgccaacctcaaggaccct
gtatccgaatgcccctggtacacgggtttgccatttattgcccacctggacagtttgcca
aacttcaccagatcaagcgacgggcctgtcagactacctatcgtagacaaatacaaggat
atgggtactgttatccttggaaagctggaatctggatccattagtaaagcccagcagctg
gtcatgatgccaaacaggcacacggtggaggttttgagcctgctgagtgacgatgtggag
acggacgacgcaagtcctggggagaacctgaagttgcggctgaagggcatagaggaggaa
gagatccttcctggttttatcctctgcagccccgacaacctctgccactctgggcgcacc
tttgatgcgcagatcgtcatcatcgagcacaaatccatcatttgtcctggttacaatgca
gtccttcacatccacacctgcatcgaagaagtgcaaattacagccttaatctgtctggtg
gacaagaagacgggagagaaaagcaaaacacgaccacgctttgtgaagcaggaccaggtt
tgtatcgccaggctccgggcagcaggagtcatctgcttagagaccttcaaagacttccct
cagatggggcgattcacactgagagacgaaggcaaaacaatcgccattggcaaagtgctg
aagctggtgccagaaaaggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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