KEGG   Maylandia zebra (zebra mbuna): 101485607
Entry
101485607         CDS       T02814                                 
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
  KO
K14328  regulator of nonsense transcripts 3
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03013  Nucleocytoplasmic transport
mze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101485607 (upf3b)
   03015 mRNA surveillance pathway
    101485607 (upf3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101485607 (upf3b)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     101485607 (upf3b)
   mRNA cycle factors
    P-body specific factors
     101485607 (upf3b)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 101485607
NCBI-ProteinID: XP_004545823
Position
LG2:29984015..29988466
AA seq 459 aa
MKEDKENNRPKEKRVEIKCEDGEKTEKSKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLYPHLFARAYINFRNQEDIVLFRDRFDGYVFIDSRGQEYPAIVEFSP
FQKTAKKRSKKKDAKCGTIVEDPDYKRFLEYYNGDDEKLTSTPEILLEEIEAKSKELVAK
KTTPLLDFLKNKQRLREEKKEERRRRELERKRLRDEERRKWREEERRKRKEAEKMKKLEK
PLEKDKDQAKDEPKIKLLKKPERGDEGNPEKPKEKSKKPEKPNKEDRSLGGSDHKRRQNI
EHKEDRGRKGDEDGRKEFRERDTDRDRDREREKERRQKERERFKRQDEERRRRREHQDGD
NSFKKREEEVKKDKPLEKKKGENMPDSPHSEKPEKPAKDNKKEDGGKRERLRNKDRPAIQ
LYQPGARSRNRAAGGGAESNSADRKPDTEARKVAEKEDD
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaaggaagacaaagaaaacaatcgaccgaaggagaaaagggtggagataaagtgtgaa
gatggagaaaagacggagaagtccaaggaaaagaaggaggccatgacaaagattgtgatc
agacgactaccaccaagtctcaccaaagaggagctggaggagcaactgcaaccgctccca
gaggtggactatttggagttcttctctaacgacacgagcctttaccctcacctctttgca
agggcttatatcaacttcagaaaccaagaggatatagtcctcttcagagatcgctttgat
ggatatgtattcattgacagcagaggtcaggagtatcctgccattgtggagttttcacct
tttcaaaaaactgccaagaaaagaagtaaaaaaaaggatgcaaagtgtggaacaattgtt
gaagatccagattacaaaaggttccttgaatattacaacggggacgacgagaagctaacg
tctacacctgagatcctgttggaggagattgaggctaaatcaaaggaactcgttgctaaa
aaaacaactcctctgctggacttcctgaagaataaacagagactcagggaggagaagaaa
gaagagcgaaggaggagggaactcgagcgcaaacgtctgcgcgatgaggagcgtcgtaag
tggagggaggaggagaggaggaaacgcaaagaggcagagaagatgaagaagctcgagaaa
ccgctggagaaggacaaagaccaagctaaagacgagccaaagataaagctcctgaagaag
ccagagagaggagatgaaggcaacccggagaagccaaaagagaagtccaagaagccagag
aagccaaataaagaggacagatctttgggaggttctgatcataagagacgtcagaacatc
gagcacaaggaggatcgaggaaggaaaggggacgaagatgggcggaaggagtttagggag
cgtgacacggatcgagacagagaccgagagcgcgagaaggagcgtcggcagaaagagagg
gaacgcttcaagcgacaggatgaggaacgtcggagaagaagggaacatcaggatggagat
aactccttcaagaagcgggaggaggaggttaaaaaagataaacccttggagaagaagaag
ggtgaaaacatgccagactccccacacagtgagaagccagagaagcctgctaaggacaac
aagaaggaggacggtgggaaaagagagcggctacggaataaggaccggcctgctattcag
ctgtaccagccaggtgcaagaagccgcaaccgtgctgcaggaggaggagctgaatccaac
tctgctgacagaaagccagataccgaggctaggaaagtggctgagaaagaagacgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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