KEGG T01541: Mzhil

Methanosalsum zhilinae: Mzhil_0867

Entry

Mzhil_0867 CDS T01541

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mzh Methanosalsum zhilinae

Pathway

mzh03030	DNA replication
mzh03410	Base excision repair
mzh03420	Nucleotide excision repair
mzh03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mzh03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mzh03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mzh03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mzh03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C GCIP DUF493

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

947097..948782

AA seq 561 aa
MTAFKEFAHVCSQIENTSSSLEITDMVAEFFRIVDTEELPVVIHFIMGEVFPAWSEEELG
IGKGLYYTSLSKVSGLSVDEIKEIVRKTGDIGKTTIEVMKNKSGDQVTFSVFFDDNTQLS
IIDVYEALKKIAAINGKGSQNIKMKNLQYIFSKASPQESQYMARLVLEELRIGVGEGIVR
DAIALAFDVPAESIERGFMLTNDMGAVGLAAKKGGIEEVEKLNMELNRPIKLMLAQVTPS
IKTAIEEMEEAAIEWKFDGARLQVHKDKDKVSIYSRKLENITNSLPDVVSAVKEYVNADT
AILDGEAFAVDENGKPKPFQEILKRLRRKYDIEITTRDIPLTVKFFDIMYLNGDYLIDLS
LIERRRLLGECVRNSNSITVDQQVVTDDPEIGEKIYSEAIRAGHEGIMIKNPQSPYTPGK
RGKNWLKKKPVMETLDLVVIGGEWGYGRRTNFIGSYTLSCYDPDSGNFLPIGKVGTGITD
ENLVELTGLFSDLIVVESGRDLEFKPEIVFEVAFEEIQKSTNYESGYALRFPRLVSIRDD
KSPHEADTISRVDEIYRSQRK

NT seq 1686 nt +upstreamnt +downstreamnt
atgacagctttcaaagaatttgcgcatgtatgcagtcagatagagaatacaagcagttca
cttgaaattacagatatggtagctgagtttttcaggatagttgatactgaagaacttcca
gttgtcatacattttattatgggggaagtatttcctgcctggagtgaagaagaacttggt
ataggtaaagggctttactatacctctttatctaaagtatcgggactttcagtagacgaa
attaaagagattgttcgaaagacgggtgatattggtaaaacaaccattgaagtcatgaaa
aataaatccggggatcaggtaaccttcagtgtcttttttgatgataatacacaattatcc
ataatagatgtatatgaagcactaaaaaaaattgctgcaattaatggtaaaggttctcag
aacataaagatgaaaaatctgcagtatattttcagtaaagcatcgccacaggaatctcag
tacatggcgcgtcttgtccttgaagagttgagaattggtgtcggggaaggaattgtaaga
gatgctattgctctggcttttgatgttccggcagagtctattgaaaggggatttatgctg
accaatgatatgggagcagttggattggctgcaaaaaaaggtggtattgaagaagttgaa
aagttaaatatggaattgaatcggcccattaaactaatgcttgctcaggtaactcccagt
attaaaaccgctattgaggaaatggaagaagctgctattgaatggaaatttgatggtgca
agactccaggtgcataaggataaggataaagtttcgatatattcaaggaagctggagaat
atcactaattcgctacccgatgtagtatctgctgtaaaggagtatgttaatgcagatact
gcaatattggatggggaagcctttgctgtggacgaaaatggaaaaccgaaaccatttcag
gaaatactcaaaaggcttcgtagaaagtacgatatagagatcactacaagagatataccc
ctgactgtaaaattctttgatataatgtatctgaatggtgattatcttattgatctttca
ctcattgaacgtagaagactgcttggcgaatgtgtcaggaacagtaactccatcacagtt
gatcagcaggttgtaacagatgatcctgaaattggagaaaagatatatagtgaagcaata
agagcgggtcatgaagggataatgatcaaaaatccacagtcaccatatacacccggtaaa
agaggcaaaaactggctcaagaaaaagccagtaatggaaacgctggatcttgtggtaatt
ggaggagaatggggatacggaagacgtactaattttataggatcttatacactttcatgt
tatgacccagatagtggaaactttttacccattggaaaggttggaactggtataaccgat
gaaaaccttgttgaactaacaggattgttttctgaccttatagttgttgaatccggaaga
gatcttgaatttaaaccggaaattgtttttgaggttgcttttgaagagatacagaaaagc
acaaattatgagtccggttatgcacttcgttttccacgacttgtcagtataagggatgat
aaatctccacatgaagccgatactatcagtcgtgtagatgaaatatacagatcacagaga
aaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MZH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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