KEGG   Candidatus Nucleicultrix amoebiphila: GQ61_05820
Entry
GQ61_05820        CDS       T04833                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
naf  Candidatus Nucleicultrix amoebiphila
Pathway
naf03030  DNA replication
naf03430  Mismatch repair
naf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:naf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GQ61_05820
   03430 Mismatch repair
    GQ61_05820
   03440 Homologous recombination
    GQ61_05820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:naf03032]
    GQ61_05820
   03400 DNA repair and recombination proteins [BR:naf03400]
    GQ61_05820
Enzymes [BR:naf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GQ61_05820
DNA replication proteins [BR:naf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GQ61_05820
DNA repair and recombination proteins [BR:naf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GQ61_05820
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ARN84883
UniProt: A0A1W6N4V6
Position
1155187..1155864
AA seq 225 aa
MREIVLDTESTGLDPKSGHRLVEIGCLELMNHVPTGNVFHCYINPERDMPQEAFNVHGLS
EEFLRDHPVFKDVAEKFLEFIQDDILVIHNARFDMKFLNHELGSLEIAPLSFERVIDTLQ
IAREKFPGSPANLDALCRRFNVDNSTRVKHGALLDAELLAEVYLELIGGRQSTFHLEEEA
QHILSRVDGHTQNVRPIRSFPASEEELKNHKEILGKISNALWNSF
NT seq 678 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcgtcctcgacaccgagtccacaggacttgaccccaaatctggtcaccgc
ttggtggaaataggatgtcttgagctgatgaatcatgttcccaccggaaatgtatttcat
tgttatatcaaccctgaaagagacatgccgcaagaagcttttaatgttcatgggttgtcc
gaagagtttttaagggatcatccagtttttaaagatgtggcagaaaaattcttagaattt
attcaagacgatattcttgtgatccataacgcgcgttttgatatgaaatttctaaatcat
gaacttggttctcttgagattgctccgttaagttttgagcgcgtcattgatacattacaa
attgcccgtgagaaatttccaggatctcctgctaatcttgatgcgctctgtcgtcgtttt
aatgtggataactcaacacgtgttaagcacggtgctcttttggatgcggaattactcgca
gaggtttatttagaattaatagggggccgtcagtctaccttccatcttgaagaagaagct
caacatatactctcaagagttgatggacacactcagaatgtgcgtccaattcgttctttt
cctgccagtgaagaggaactaaagaatcataaggaaattttaggaaaaatttctaatgct
ctttggaactctttttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (218)   
   KEGG ORTHOLOGY (1)   
   RefGene (215)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (231)   

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