KEGG   Necator americanus (New World hookworm): NECAME_00222
Entry
NECAME_00222      CDS       T04867                                 
Name
(RefSeq) LSM domain protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03018  RNA degradation
nai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECAME_00222
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECAME_00222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nai03019]
    NECAME_00222
   03041 Spliceosome [BR:nai03041]
    NECAME_00222
Messenger RNA biogenesis [BR:nai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECAME_00222
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NECAME_00222
Spliceosome [BR:nai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NECAME_00222
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 25340266
NCBI-ProteinID: XP_013304099
UniProt: W2TLH7
Position
Unknown
AA seq 99 aa
MSRRQNPSEFLKQIIGKPVVVKLNSGVDYRGILACLDGFMNIALEQTEEYNNGQLQNKYG
DAFIRGKKRKEEYALEECRPDREVRVSFFEASQPAVKGR
NT seq 300 nt   +upstreamnt  +downstreamnt
atgagtcgtcggcaaaatccgtctgaattcctaaaacaaataattgggaagccggttgtg
gtgaagctaaattccggggtcgactatcgcggtattcttgcttgtctagatggattcatg
aatattgctcttgaacaaacggaagagtacaataacgggcagctgcagaacaaatacgga
gatgccttcattcgcgggaaaaagagaaaagaagagtatgccctcgaagaatgtagaccc
gaccgagaagttcgtgtctccttcttcgaagctagtcaaccagcggtaaagggtaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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