KEGG T02218: B005

Nocardiopsis alba: B005_1959

Entry

B005_1959         CDS       T02218

Symbol

gyrA

Name

(GenBank) DNA gyrase, A subunit

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

nal Nocardiopsis alba

Brite

KEGG Orthology (KO) [BR:nal00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nal03032]
    B005_1959 (gyrA)
   03400 DNA repair and recombination proteins [BR:nal03400]
    B005_1959 (gyrA)
Enzymes [BR:nal01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B005_1959 (gyrA)
DNA replication proteins [BR:nal03032]
Prokaryotic type
  DNA Topoisomerases
   B005_1959 (gyrA)
DNA repair and recombination proteins [BR:nal03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B005_1959 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C FaeA

Other DBs

NCBI-ProteinID:

AFR09724

UniProt:

J7LFT0

Position

complement(2033035..2035569)

AA seq 844 aa
MTDRVEPVDIQVEMQRSYLDYAMSVIVGRALPDVRDGLKPVHQRVLYAMYDGGYRPDRGY
FKCARVVGDVMGNYHPHGDSAIYDTLVRLAQWWSMRMPLVDPNGNFGSPGNDPAAAMRYT
ECKLAPLAMEMLRDIDKETVDFRPNYDGRSAEPVVLPARFPNLLVNGSSGIAVGMATNIP
PHNLREVADGVNWYLDHPEVDDEQLLDELIARVKGPDFPTRGLIVGKRGIEEAYRTGRGS
ITMRAVVEVEEDGRGRQTLVITELPYQVNPDNLALKIADLVKDGKITGIADVRDESSGRT
GQRLVIVLKRDAVAKVVLNNLYKHTQLQETFGANMLALVDGVPRTLRLDQLIRHWVKHQV
EVIVRRTKYLLRKAEERAHILRALLRAMDRIDEVIALIRSSASADEARTGLMGLLEIDDI
QARAILDMQLRKLAALERNQLTAEYDELMTLIADYNDILASDERQRSIIREELGEIVEKY
GDERRTHIIPFEGDMRMEDFIAEEDVVVTISRGGYAKRTRIDNYRAQKRGGKGVRGAQLK
QDDIVQHFFVTTTHHWILCFTNQGRVYRTKAYELPEAARDARGQHVANLLPFQPGEEIAQ
IMALRDYEAAPYLVLATREGLVKKSRLEDFDSARSAGIIAINLREDDELIAARLVFPEDD
LLLISSDAQAIRFSASDESLRPMGRATSGVIGMRFLEGDYLLSMDVIRPGDGSTDVLVAT
ENGYAKRTPSEQYPTQNRGGKGVLTAKVVEARGKLVGALMVDPEVDEIFAITSAGGVIRT
GAAEVKQSGRTTMGVRLMNLDKGNKIVAVAANAEAAEDVEEIDDTEGPLDTGDQEVAGEG
NQEA

NT seq 2535 nt +upstreamnt +downstreamnt
gtgacggaccgggtcgaaccggtcgacatccaggtcgagatgcagcgcagctacctcgac
tacgcgatgtccgtcatcgtcggccgcgccctccccgacgttcgagacggcctcaagccc
gtccaccagcgtgtgctgtacgcgatgtacgacggcggctaccggcccgaccgcggctac
ttcaagtgcgcccgcgtcgtcggcgacgtgatgggcaactaccacccgcacggtgacagt
gcgatctacgacaccctggtccgcctggcccagtggtggtcgatgcggatgccgctggtc
gacccgaacggcaacttcggctctccgggcaacgacccggcggccgccatgcgctacacc
gagtgcaagctcgcgccgctggccatggagatgctccgggacatcgacaaggagaccgtc
gacttccggcccaactacgacggccgctccgccgagcccgtcgtgctgccggcgcgtttc
ccgaacctgctggtcaacggctcctccgggatcgcggtcggtatggcgaccaacatcccg
ccgcacaacctgcgcgaggtcgccgacggcgtcaactggtacctggatcaccccgaggtc
gacgacgagcagctgctcgacgagctcatcgcccgggtcaagggccccgacttccccacc
cgcggactcatcgtgggcaagcgcgggatcgaggaggcctaccggaccggccgcggctcc
atcaccatgcgcgccgtcgtcgaggtcgaggaggacggccggggccggcagaccctggtc
atcaccgagctgccctaccaggtcaacccggacaacctcgcgctgaagatcgccgacctg
gtcaaggacggcaagatcaccggcatcgccgacgtgcgcgacgagagcagcggccgtacc
ggtcagcgtctggtcatcgtgctcaagcgcgacgccgtggccaaggtcgtgctgaacaac
ctgtacaagcacacccagctccaggagaccttcggcgccaacatgctggccctggtcgac
ggggtgccgcgcaccctgcgcctggaccagctcatccggcactgggtcaagcaccaggtc
gaggtcatcgtccgccggacgaagtacctcctgcgcaaggccgaggagcgggcgcacatc
ctgcgcgccctgctgcgggccatggaccgcatcgacgaggtcatcgccctcatccgctcc
agcgcgtcggccgacgaggcccgcaccggactgatggggcttctggagatcgacgacatc
caggcccgcgccatcctcgacatgcagctccgcaagctcgcggcgctggagcgcaaccag
ctcaccgccgagtacgacgagctcatgacgctcatcgccgactacaacgacatcctcgcc
tcggacgagcgccagcgctccatcatccgcgaggagctcggcgagatcgtcgagaagtac
ggcgacgagcggcgcacgcacatcatccccttcgagggcgacatgcgtatggaggacttc
atcgccgaggaggacgtggtcgtcacgatctcccgcggtggatacgccaagcgcacccgc
atcgacaactaccgggcgcagaagcgcggtggcaagggcgtgcgcggggcccagctcaag
caggacgacatcgtccagcacttcttcgtcaccaccacccaccactggatcctgtgcttc
accaaccagggacgggtgtaccggacgaaggcctacgagctgccggaggccgcacgtgac
gcgcgcggccagcacgtggccaacctgctgcccttccagccgggcgaggagatcgcgcag
atcatggccctgcgcgactacgaggccgccccctacctggtgctggccacccgggagggc
ctggtcaagaagtcgcgtctggaggacttcgactccgcgcgttcggcgggcatcatcgcg
atcaacctgcgcgaggacgacgagctgatcgccgcccgactggtcttccccgaggacgac
ctgctgctgatctccagcgacgcccaggcgatccgcttctccgcctccgacgagtcgctg
cgtccgatgggtcgcgccaccagcggtgtgatcggcatgcgcttcctggagggcgactac
ctgctctccatggacgtcatccggcccggtgacggttcgaccgacgttctggtcgccacc
gagaacggctacgccaagcggaccccgtccgagcagtacccgacccagaaccggggcggc
aagggcgtcctgaccgccaaggtcgtggaggcccggggcaagctggtcggcgccctcatg
gtggacccggaggtcgacgagatcttcgcgatcacctccgcgggcggggtcatccgcacc
ggggccgccgaggtgaagcagtccggccgtaccaccatgggcgtccggctgatgaacctc
gacaagggcaacaagatcgtcgccgtcgccgccaacgccgaagcggcggaggacgtcgag
gagatcgacgacacggagggtccgctcgacacgggcgatcaagaggtcgcgggtgaaggc
aaccaggaggcctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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