KEGG   Nocardiopsis alba: B005_5377
Entry
B005_5377         CDS       T02218                                 
Name
(GenBank) 3'-5' exonuclease family protein
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
nal  Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:nal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nal03016]
    B005_5377
Enzymes [BR:nal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     B005_5377
Transfer RNA biogenesis [BR:nal03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    B005_5377
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC DUF2866
Other DBs
NCBI-ProteinID: AFR10296
UniProt: J7LC74
Position
5577283..5578617
AA seq 444 aa
MLAFMSVEDGPPTASGGHSAYRSGVANALNSKTDSREPDHDDSERAPLLREPREGLPEVT
SDPGTLAGVIAALGAGTGPVAVDAERASGYRYGQRAYLVQLRREGSGSALIDPIACPDLS
GVDAAIGEAEVVLHAAHQDLPCLAEVNLRPGRLFDTELAGRLLGYQRVGLGFMVERLLDI
RLAKEHSAVDWSQRPLPEDWLRYAALDVEILIELRDRLEAELEEAGKLEWAREEFAAILA
APPKEPRTDPWRRTSGIHKVRKQRSLAAVRELWYERDRIARERDTSPGRVLPDAAIVEAA
TTMPRDANELNRIRQFGIKLARRYPATWLKAIDRARDMAQSELPRPNAPGDGPPPVNRWA
DRAPEAARRLDAAKSTVARIAEEITMPTENLLLPDTVRRLAWTPPETVDPDSVGAFLRSR
GARNWQVGLTAEPLTKALRVPEEG
NT seq 1335 nt   +upstreamnt  +downstreamnt
gtgctcgctttcatgagcgtcgaggacgggccgcccaccgcgtcgggtggccacagcgca
taccgtagtggtgtggcgaacgcgttgaactccaagacagactcccgcgaacccgaccat
gacgactcggagagggcacctctactgcgggaaccacgcgagggtcttcccgaggtcacc
tccgaccccggcactctggcgggtgtgatcgcggccctgggcgcgggcaccggccccgtc
gccgtggacgccgagcgcgcgtcggggtaccggtacggccagcgcgcctatctggtgcaa
ctgcgtcgggagggttccggttcggccctgatcgatccgatcgcctgtcccgatctgagc
ggggtcgacgcggccatcggcgaggccgaggtggtgctgcacgccgcgcaccaggacctg
ccctgtctggccgaggtcaacctgcgtcccggtcggctcttcgataccgagctggccgga
cgcctgctgggctatcagcgggtcgggctgggcttcatggtggagcggttgttggacatc
cgtctggccaaggagcactcggccgtggactggtcccagcggccgttgccggaggactgg
ctgcgctacgcggcgttggacgtggagatcctcatcgaactccgggaccgtctggaggcg
gagctggaggaggcgggcaaactggagtgggcccgtgaggagttcgccgcgatcctggcg
gccccgcccaaagagccgcgcaccgatccgtggcgacgcacctcggggatccacaaggtg
cgtaagcagcgttccctggccgccgtgcgcgagctctggtacgaacgcgatcgcatcgcg
cgggagcgggacacctctcccggcagggtcctgcccgacgcggcgatcgtggaggcggcg
acgaccatgccgcgcgacgccaatgagctgaaccggatccgccagttcggcatcaagctg
gcgcgacgctatccggccacgtggctgaaggcgatcgatcgggcccgggacatggcccag
tcggagctgccgcgccccaacgctccgggcgacggtcctccgccggtgaaccgttgggcc
gaccgcgcgccggaggccgcacggcggctggacgcggccaagtcgacggtggcgcggatc
gcggaggagatcacgatgccgaccgagaaccttctgctccccgacaccgtcagaaggttg
gcctggacgcctcccgagaccgtcgatccggactcggtgggcgccttcctgcggtcccga
ggggcccggaactggcaggtcgggttgacggcggaaccgctgacgaaggccttgcgggtg
cccgaagaggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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