KEGG   Nitrospirillum amazonense: Y958_09260
Entry
Y958_09260        CDS       T04935                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
nao  Nitrospirillum amazonense
Brite
KEGG Orthology (KO) [BR:nao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nao03009]
    Y958_09260
Enzymes [BR:nao01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Y958_09260
Ribosome biogenesis [BR:nao03009]
 Prokaryotic type
  ribosomal protein modification factors
   Y958_09260
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM DUF5005 DUF1732
Other DBs
NCBI-ProteinID: ASG20992
UniProt: A0A248JQI6
Position
1:2010397..2011752
AA seq 451 aa
MSKPTLITNTPSPNGAPKVGIVSLGCPKALVDSERILTKLRSEGYEVSPSYDDADVVLVN
TCGFLDSAKQESLDAIGEAMRENGRVIVTGCMGVEEDRIREMYPNVLAVTGPHQYEQVVS
AVHDHLPPVHNPYTDLVPPEGLRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLASRPAG
NVLREAERLVNAGVRELMVISQDTSAYGLDLRHAESEFKGRKVRAHMTDLARELGSLGAW
VRLHYVYPYPHVDEVIPLMAEGLVLPYLDIPFQHASPNVLKAMKRPANQEKVLDRIRGWR
DVCPDLTIRSTFIVGFPGETEQDFQFLLDWLSEAKIDRLGCFKYEAVDGAPANALEGAVP
EEVKEERWNRLMAHQQAISEERMQAKVGRTIDVIIDEVDEEGAIGRSAADAPEIDGSVFL
NGDTSVAVGDIVQVTVEHAEEYDLWGTRVDA
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagcaagcccaccctcatcaccaataccccgtcccccaatggcgcaccgaaggtcggc
atcgtcagcctgggctgccccaaggcgctggtggacagcgaacgcatcctgaccaagctg
cgctcggaagggtatgaggtgtcgcccagctatgacgacgccgacgtggttctggtcaac
acctgcggcttcctggacagcgccaagcaggaaagcctggatgccatcggcgaggccatg
cgcgagaacggccgcgtcatcgtcaccggctgcatgggcgtggaagaggaccgcatccgg
gagatgtaccccaacgtgctggccgtcaccggcccccaccagtacgagcaggtggtgtcg
gcggtgcatgaccacctgcccccggtgcacaacccctacaccgacctggtgccgcccgag
ggcctgcgcctgacgccgcgccactacgcctatctgaagatttccgagggctgcaaccac
cgctgcagcttctgcatcatcccctcgctgcgcggcgacctggccagccggccggccggc
aatgtgctgcgcgaggcggagcggctggtgaacgccggcgtgcgcgagctgatggtcatc
tcccaggacaccagcgcctatggcctggatctgcgccatgccgagagcgagttcaagggc
cgcaaagtccgcgcccacatgaccgacctggcccgtgaactggggtccttgggcgcctgg
gtgcgcctgcactacgtctacccctacccgcatgtggacgaggtcattcccctgatggcg
gaaggcctggtgctgccctatctggacattcccttccagcacgccagccccaacgtgctg
aaggccatgaagcggccggccaaccaggagaaggtgctggaccggattcgcggctggcgc
gacgtctgccccgacctgaccatccgctccaccttcatcgtcggcttccccggcgagacg
gagcaggatttccagttcctgctggactggctgtcggaagccaagatcgaccggctgggc
tgcttcaagtatgaggccgtggacggcgcccccgccaacgcccttgagggcgccgtgccg
gaggaggtgaaggaagagcgctggaaccgcctgatggcccaccagcaggccatcagcgag
gagcgcatgcaggccaaggtgggccgcaccatcgacgtcatcatcgacgaggtcgatgag
gaaggcgccatcggccgctccgcggcggatgcgccggaaatcgacggcagcgtcttcctg
aacggcgacaccagcgtcgcggtgggcgacatcgtccaggtgaccgtggagcacgccgaa
gaatacgacctgtggggcacccgcgtggacgcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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