KEGG   Nitrospirillum amazonense: Y958_30485
Entry
Y958_30485        CDS       T04935                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
nao  Nitrospirillum amazonense
Pathway
nao03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Y958_30485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nao03400]
    Y958_30485
DNA repair and recombination proteins [BR:nao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Y958_30485
SSDB
Motif
Pfam: Ku DUF5788 WASH-7_mid
Other DBs
NCBI-ProteinID: ASG25271
UniProt: A0A248K3G9
Position
4:complement(655781..656665)
AA seq 294 aa
MAPRANWKGFLKIGEVSCPVALYTAASSSERIAFHTVNRATGHRVHRQFVDSETGKPVDR
EEQVKGYEVARGDYVVLEPDEVAAVVPESDKTLSVLAFIPCADIDDVYFDKPYYLAPSDR
HADEAFALIREGMRAKKVAALAQTVLFRRVRTVLVRAHGAGLIATTLNFDYEVRSAAQAF
DEIADIKIDGEMLDLAKHIIETKKGVFKPEDFDDRYEAALADLVKAKLEGKTPPARKRAP
PAKTTDLMAALRESAGLAGKPVAKKAASNANRAKSRSTRAAPKPKAVPARRKAS
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcacccagggcgaactggaaggggttcctgaagatcggggaggtcagctgcccggtg
gcgctctacaccgccgcctcatcctccgaacggatcgccttccatacggtcaaccgggcc
acgggccaccgcgtgcatcggcagttcgtggatagcgagacgggcaagccggtggaccgt
gaggagcaggtgaaggggtacgaggttgcccgcggcgactatgtggtgctggagccggat
gaggtggcggccgtcgtgccggaaagcgacaagaccttgtccgtcctggccttcatcccc
tgtgccgacatcgacgacgtctatttcgacaagccctattacctggcgcccagcgaccgg
cacgcggatgaggccttcgccttgatccgcgaaggcatgcgcgccaaaaaggtggcggcg
ctggcgcagacggtgctgttccggcgggtgcgcaccgtcctggtccgcgcccatggcgcc
ggcctgatcgccaccaccctgaacttcgactatgaagtgcgatccgctgcccaggccttc
gatgagatcgccgacatcaagatcgatggcgagatgctggacttggccaagcacattatc
gagaccaagaagggtgtcttcaagcctgaggacttcgacgaccggtacgaggcggcgctg
gccgacctggtgaaggccaagctggagggcaagacgccgccggcgcggaaacgggcgccg
ccggccaagactaccgacctcatggcggccttgcgggaaagcgcggggctggccggcaag
ccggtggccaagaaggccgcatccaacgccaaccgcgccaaatcccgctccacccgggcg
gcgcccaagccgaaggcggtccccgcccgacggaaggccagctga

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