KEGG   Novosphingobium aromaticivorans: Saro_0596Help
Entry
Saro_0596         CDS       T00322                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nar  Novosphingobium aromaticivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:nar00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Saro_0596
Enzymes [BR:nar01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Saro_0596
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Saro_0596
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
641330..642142
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTVRGLATVLDGQVIRRVAVNRADLRRPFPEDLAQALTGARVTGMGRRAKYG
LIHTDRERTMVFHLGMSGRWRIDPEDIGKHDHLVLETGEGRVLSLNDARRFGSVDLVDTG
RLEEWPPFAALGPEPLGPGLKARHLAKAFEGRIAAVKLLLLDQQIVAGLGNIYVCEALYR
ARIHPEREGGKVSARALGLLVPAIRAVLEESIAAGGSTLRDYARPDGELGYFAKDWRVYG
REGEPCQCGGVVKRIVQGGRSTFFCPRCQK
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaacttcccgaagtagaaacgaccgtccgtggcctcgcaaccgtccttgacggg
caggtgatacgccgcgtggcggtgaaccgcgctgacctgcgccggccttttcccgaggac
ctcgcccaggcgctgaccggtgcgcgggtgacgggcatgggacgccgcgcgaagtacggc
ctgatccacactgaccgcgaacgcacgatggtgttccacctgggcatgtcggggcgctgg
aggatcgatccggaagacatcggcaagcacgaccatcttgtgctggaaacgggcgaaggg
cgggtgctttcgctaaacgatgcgcggcgtttcggttccgtcgatcttgtcgataccggc
aggctggaggaatggccgccgttcgccgcgcttgggcccgaaccgttggggccgggactt
aaggcgcgccatctggcgaaggcattcgagggccggatcgcggcggtgaagctcctgctg
ctcgaccagcagatcgtggccgggctgggcaacatctatgtctgcgaggcgctgtaccgc
gcgcgcatccaccccgagcgcgaaggcggcaaggtttcggcaagggcgctgggcctgctg
gtgccggcgatccgcgctgtgctggaggagtccatcgcggcgggcggttccaccttgcgc
gactatgcgcggcccgacggcgagcttggctatttcgccaaggactggcgcgtctatggc
cgcgagggcgaaccctgccagtgcgggggcgtggtgaagcggatcgtgcagggcgggcgc
tcgaccttcttctgccccaggtgccagaagtag

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