KEGG T00322: Saro

Novosphingobium aromaticivorans: Saro_1695

Entry

Saro_1695 CDS T00322

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

nar Novosphingobium aromaticivorans

Pathway

nar03410	Base excision repair
nar03420	Nucleotide excision repair
nar03430	Mismatch repair
nar03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:nar03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:nar03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:nar03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:nar03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S

Other DBs

NCBI-GI:

87199712

NCBI-GeneID:

3916270

UniProt:

Q2G7N8

Position

1779469..1782000

AA seq 843 aa
MGRNDPLAAYNAKRDFARTAEPAGKRKSSATGNLFIVQKHDATRLHWDFRMEVDGVLKSW
AVTRGPSPDPDDKRLAVQTEDHPLEYARFEGIIPEGEYGGGTVMLWDKGTWEPVEGKSAK
DLEKGHLHFRLEGERMKGEWLLVRLKRRGNEKRDNWLLRKLDDAYAGQGDQLVERGLTSV
LTGRTMAEIASDKAGSHSLKGKRGKAFASVMEEAGTHNRKVGKARGKAPSRARRNAPLPA
FQPVQLATLVDTVPDGRQWLYEIKFDGYRALVAVRGTEVRVFTRSGLDWTEKFAPLARHL
AGLKLPSCLIDGEIVAADADGNPDFSRLQAVLKRGHGEQGEGDALSFHAFDLLELEGEDL
KPLPNVERKQKLAALLAGVSPPIHVADHIIGGGEKLLGALCGAGQEGIICKRADAAYAGK
RTQNWLKVKCVARQEFIVVGFTRSSARRRPFASLLLAQREGKALVYKGKVGTGFDEDLLQ
DLATRFEALKVDEGPLDVPITEARGVTWLKPELVAEIAFAEFTAEGRVRHASFVGLREDK
KAADVVPERPAPLVVQPEIVPISNRERVIFPESGQTKGDLADYYAAMAPAMLPFIANRPV
SLVRCPQGRARHCFFQKHDSGSFGEHVHHVPIREKDGNEEEYLFVSDAAGILSCVQMGTI
EFHGWCSLASDVEAPERMVIDLDPDEGLDFNDVKRAARDIRDRLSDLGLVSFAMLSGGKG
VHVVVPLRPDHTWEAHASFAERFARALALAEPDRYVATMSKARRKGRIFIDWLRNRRGST
AVMPYSARARANAPVAVPIAWEELDDFANAHPFCIGDTAGLLKRSEGKSLRGWGMAQQSL
PDV

NT seq 2532 nt +upstreamnt +downstreamnt
atggggcgcaacgatccgctcgccgcctacaacgccaagcgcgacttcgcgcgcactgcg
gaacctgccggcaagcgcaagtccagcgccacgggcaatctcttcatcgtccagaagcac
gacgccacccgcctgcactgggacttccgcatggaggttgatggcgtgctcaagagttgg
gccgtgacccggggccctagccccgatcccgacgacaagcgcctcgctgtccagaccgag
gaccaccccctcgaatacgcccggttcgaaggcatcatccccgaaggcgagtacgggggc
ggcaccgtcatgctctgggacaagggcacctgggagccggtcgagggcaagagcgccaag
gatctggaaaaggggcacctccatttccgcctcgagggggagcggatgaagggcgaatgg
ctgcttgtccgcctcaagcgtcgcggcaatgaaaagcgcgacaactggctcctgcgcaag
ctggacgacgcctatgcgggccagggcgaccagctcgtcgagcgcggcctgaccagcgtc
ctcaccggccgcaccatggccgaaatcgcctccgacaaggctggcagccattcgctcaaa
ggcaagcgcggcaaggccttcgcttcggtgatggaagaagcaggcacgcataaccgcaag
gtcggcaaggcgcgcggcaaggcaccgtccagggcgcgccggaacgcaccgctacccgcc
ttccagcccgtccagctcgcaaccctggtcgatacggtgcccgatgggcgccaatggctg
tacgagatcaagttcgacggctaccgcgcgctcgtcgcagtgcggggaaccgaggtccgc
gtcttcacccgcagcggtctcgactggaccgaaaagttcgcgccgcttgcccgccatctc
gccgggctcaagctgccgtcgtgcctgatcgacggcgagatcgtcgccgccgatgccgat
ggcaatcccgatttctcgcggcttcaagccgtgctcaagcgcgggcatggcgaacagggc
gagggtgatgccttgtcgttccacgccttcgacttgctggaactcgaaggcgaagacctg
aagcccctgcccaatgtagagcgcaagcagaagctcgccgcgctgcttgccggggtctcg
ccgccgatccacgtcgccgaccacatcatcggcggcggcgaaaagctgcttggcgcgctg
tgcggcgcggggcaggaagggatcatctgcaagcgcgcggacgcggcctatgcgggcaag
cggacgcagaactggctgaaggtgaagtgcgtggcccgccaggaattcatcgtcgtcggc
ttcacccggtccagcgcccgccgccgccctttcgcctcgcttctcctggcccagcgcgag
ggaaaggcgctggtctacaagggcaaggtgggcaccggctttgacgaggacctgctgcaa
gacctcgccacccggttcgaagccctcaaggtcgacgaaggtccgctcgatgtgcccata
accgaagcgcgcggcgtgacctggctgaaacccgaactcgtcgcggaaatcgcctttgcc
gaatttaccgccgaaggccgtgtccgccacgccagcttcgtcggtctgcgcgaagacaag
aaggccgcggacgtcgtccccgaacggcccgccccgctggtcgttcagccggaaatcgtg
ccgatcagcaatcgcgagcgggtgatctttcccgaaagcggccagaccaagggcgacctt
gccgattactacgccgcgatggcgcccgcgatgctcccgttcatcgccaaccgccccgtc
agcctcgtccgctgtcctcaggggcgcgcgcgccactgcttcttccagaagcacgatagc
ggctcgttcggcgaacacgtccaccacgttccgatccgcgagaaggatggcaacgaggag
gagtatctgttcgtcagtgacgccgccggcattctctcgtgcgtgcagatgggcacgatc
gagttccacggctggtgttctctggcaagcgatgtcgaggcgcccgaacggatggtcatc
gacctcgatcccgacgaggggctcgatttcaacgacgtcaagcgcgccgcccgcgatatt
cgtgaccgcctgtccgacctcggtctcgtcagctttgccatgctttccggcggcaagggc
gttcacgtcgtcgtgccgctgcggcccgaccacacctgggaggctcacgccagctttgcc
gaacgttttgcccgcgcgctcgccctggcggaacccgatcgctacgtcgcaacgatgagc
aaggccaggcgcaagggccgcatcttcatcgactggctccgcaaccggcgcggcagcacc
gctgtcatgccctattcggcgcgcgcccgcgccaacgctcccgtcgcggtgccgatcgcc
tgggaggaactcgacgacttcgcgaacgcccaccccttctgcatcggcgatacggcagga
ctactcaagcgtagcgaaggcaagtcgctgcgcggctggggaatggcccaacagtccctc
ccggacgtttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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