KEGG   Novosphingobium aromaticivorans: Saro_4006
Entry
Saro_4006         CDS       T00322                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
nar  Novosphingobium aromaticivorans
Brite
KEGG Orthology (KO) [BR:nar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_4006
Secretion system [BR:nar02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   Saro_4006
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 TraG-D_C T4SS-DNA_transf TrwB_AAD_bind Fer4_NifH CbiA AAA_16 FtsK_SpoIIIE Mg_chelatase nSTAND3 ABC_tran NACHT
Other DBs
NCBI-ProteinID: ABP64247
UniProt: A4XE86
Position
pNL1:complement(171988..174594)
AA seq 868 aa
MASHGFWDRFLDMLFGESAHPEAERPVLGAPMLSNWLPYRSYDKKHGLFINTDSLGFILE
LAPMMGADERSGELLTQFLSDAVPSGCEIQLIHWQSPSVGERIADWVMPRVVAKGVYGRA
AMHRARWLRRAAWMSISRDAPFYLRNTRVILSVGARLSGPIGADTLASVRDSLHGTLQSL
SIPARDMGPVELIAFLDDFLCPAVDNADKPEHYSELDPINVQCVRRDLETQVTPDRIVLQ
TERFRPTGERQDGAPVIGEVVPDKFDWRFFSVRNLPKQWAPWDVQKIIGDVINDKLRFGC
NVMTVLGLVYQDEEAVASRAGLKVMRTTSLADSRSARFLPQLSEQRDEWQYVQAEIRQGR
KLAQVYYGVGALSPLGKGDINERMVKSVYKACGWDLIDERYLQVMGLLAAMPLSLPNGLS
ADLKRMKRFKTMLTTTAASIAPLQGEHTGGHIPHVLLIGRRGQPFFWSPFQNAAGNHNVA
VFGKSGSGKSVFLQDVCAAMSGAGAKVIVIDDGRSFEHMVKAFGGAFVEFKLSSGFSLNP
FDMIDGEALASDEDGEDYEVECLAMLKSIVGQMARQQDRLSDTERGLIDSAVSTVWREKQ
RHGTIDDVAAALRALPSPYAGDLADAMSPFLKGGTYGRFFEGACSIDLSAGLTVFELSDL
SSKPELRSVALTALMFLTLRVMRDLDRSVPKLTMIDEAWQLLGGGQMGQAIETYARTCRK
YGGSLITATQSLNDFYKSEGSLAALENSDWSIVLQQKEETINDLAKHQRFEMDHYTESLL
RSLKRNGTEYSDVLIKGPETLAVGRLVLDPYSATLYSSSPRVFSEIEDKVRGGLALPDAI
ERVAFPDFVPPEPGAPDFAEGELAEAAE
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcctcgcacgggttctgggaccggttcctcgatatgctgttcggcgaaagcgcgcat
ccggaggcggagcgcccggtgctcggcgcgccgatgctgtcgaactggctgccctatcga
agctacgacaagaagcacggcctgttcatcaacacggactcgctcgggttcattctcgag
ctggccccgatgatgggcgcagacgagcgcagcggcgagctgctgacccagtttctgtcg
gacgccgtgccctcgggctgcgagatccagctgatccactggcagagtccctcggttggc
gaacgcatcgctgattgggtgatgccgcgcgtggtcgccaagggggtctatggccgcgcg
gcgatgcaccgggcgcgctggctgcgccgcgccgcctggatgtcgatctcgcgcgacgca
ccgttttacctgcgcaacacccgggtgatcctctcggtcggtgcccggctcagtggcccg
atcggggccgacacgctcgcctcggtgcgcgacagtcttcacgggacgctgcagtcgctc
tcgatcccggcccgcgacatgggaccggtcgaactgatcgccttcctcgacgattttctc
tgcccggcggtcgataacgccgacaagcccgaacactattccgagctcgatccgatcaac
gtccagtgcgtgcggcgcgatctcgaaacccaggtcacccctgaccggatcgtgctccag
accgagcgcttccgccccactggcgagcgccaggacggcgcgccggtgatcggcgaggtc
gtgcccgacaagttcgactggcgcttcttctcggtgcgcaacctccccaaacaatgggcg
ccgtgggacgtccagaaaatcatcggcgacgtcatcaacgacaagctgcgcttcggctgc
aacgtcatgaccgtgctcgggctcgtctaccaggacgaggaagcggtcgcctcgcgcgcg
ggcctcaaggtcatgcgcaccaccagccttgccgacagccgctcggcgcgcttcctgccc
cagctctccgagcagcgcgacgaatggcaatacgttcaggccgagatccgccagggccgc
aagctcgcgcaggtctactacggcgtcggcgcgctctcgcccttgggcaagggcgacatc
aacgagcgcatggtgaagtcggtctacaaggcctgcgggtgggacctcatcgacgagcgc
tacctccaggtgatggggctgctcgcagcgatgccgctgtcgctccccaatgggctctcg
gctgacctgaagcgcatgaagcgcttcaagaccatgctcaccaccaccgcggcctcgatc
gcgccgctccagggcgagcacaccggcgggcacatcccgcacgttctgctcatcggccgg
cgcgggcagccgttcttctggtcgccgttccagaacgcggcgggcaatcacaacgtcgcc
gttttcggcaagtcgggctcgggcaagtcggtattcctgcaggacgtctgtgccgcgatg
tccggcgcgggggccaaggtcatcgtgatcgatgacggccgctcgttcgagcacatggtc
aaagccttcggcggcgctttcgtcgagttcaagctatcctctggcttctcgctcaatccc
ttcgacatgatcgacggcgaggcgctagcgagcgacgaggacggcgaggactatgaggtc
gaatgcctcgcgatgctcaaatcgatcgtcggccagatggcgcgccagcaggaccgcttg
tccgacaccgagcgcgggctgatcgattccgcggtgagcacggtctggcgcgagaaacag
cgccatgggacgattgacgatgttgccgcggcgctgcgcgcgctgccttcgccctatgcc
ggcgatcttgccgatgcgatgtcgccgttcctaaaaggcggcacctatggccgctttttc
gaaggcgcctgctcgatcgacctctcggccgggctcaccgtgttcgagctctccgacctc
tcctcgaagcccgaactgcgctcggtcgcgctgaccgcgctcatgttcctgacacttcgg
gtgatgcgcgatctcgaccgctcggtgcccaagctgacgatgatcgacgaagcctggcaa
ctccttggcggcgggcagatgggccaggcgatcgagacctatgcccgcacctgccgcaaa
tatggcggctcgctgatcacagcgacccagtcgctcaacgacttctacaagtcggaaggt
tcgctcgccgcactcgaaaactcggactggtcgatcgtcctccagcagaaggaagagacg
atcaacgatctcgccaagcaccagcgcttcgagatggaccattacacggaaagcctgctc
cgctcgctgaagcgcaacgggaccgagtattccgacgtcctgatcaaaggccccgagacg
cttgctgtagggcgccttgtgctcgatccctattcggcgacgctctattcctcgagcccc
cgggtcttttccgagatcgaggacaaggtgcgcggcggcctggcgctccccgatgcgatc
gagcgggtggccttccccgatttcgtgccgcccgagcccggcgcgcccgactttgccgag
ggcgagcttgcggaggcggccgaatga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

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