KEGG   Nocardioides sp. JS614: Noca_0157Help
Entry
Noca_0157         CDS       T00443                                 

Definition
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nca  Nocardioides sp. JS614
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:nca00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Noca_0157
Enzymes [BR:nca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Noca_0157
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Noca_0157
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(172231..173097)
Genome map
AA seq 288 aa AA seqDB search
MPELPEVEALALDLRGRLDGHAIAKIHVAAFSALKTFDPPLSALEGTLVDDVTRHGKFLD
IEASGLHLVLHLARAGWVRWRDEVPTIPPKPSTKSTLAVRIVLDDQSGLDVTEAGTRKSL
AMYVVRDPHDVPGIASLGPDPLTDEFTIDRLREILEREGRKQLKGVLRHQGTIAGIGNAY
SDEILHAARMSPFKAAGTLTDDELQVLYDALRGTLGDAVGRSRGLAASELKGEKKSHLAV
HGRAGQACPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSKLLK
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctgcccgaggtggaagccctggccctcgacctgcggggccggctggacggc
catgccatcgcgaagatccacgtcgccgcgttcagcgcgctcaagaccttcgacccgccg
ctgtccgcgctcgaggggaccctcgtcgacgacgtgacccggcacgggaagttcctcgac
atcgaggcctccggcctgcacctggtgctgcacctggcgcgcgccgggtgggtccgttgg
cgcgacgaggtccccacgatcccgcccaagccgagcacgaagtccaccctcgcggtccgc
atcgtcctcgacgaccagtccgggctcgacgtcaccgaggccggcacccgcaagagcctg
gcgatgtacgtcgtccgtgacccgcacgacgtccccggcatcgccagcctcgggccggac
ccgctgaccgacgagttcaccatcgaccggctgcgcgagatcctcgagcgcgagggccgc
aagcagctcaagggcgtgctgcgccaccagggcaccatcgccggcatcggcaacgcctac
tccgacgagatcctgcacgccgcccggatgtcgccgttcaaggcggcgggcacgctcacc
gacgacgagctgcaggtcctgtacgacgccctccgcggcaccctcggcgacgcggtcggg
cgctcccgcgggctggcggcgagcgagctgaagggcgagaagaagtcccacctcgcggtg
cacgggcgcgccgggcaggcctgcccggtgtgcggcgacacggtccgcgaggtgtccttc
gccgactccagcctgcagtactgcccgacctgccagaccggcggcaagccgctcgccgac
cgacggctcagcaagctgctgaagtag

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