| Entry |
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| Gene name |
ligC
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| Definition |
ATP-dependent DNA ligase (EC:6.5.1.1)
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| Orthology |
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| Organism |
nca Nocardioides sp. JS614
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| Pathway |
| Base excision repair | | Nucleotide excision repair | | Mismatch repair | | Non-homologous end-joining |
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| Class |
Genetic Information Processing; Replication and repair; Base excision repair [PATH: nca03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH: nca03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH: nca03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH: nca03450]
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
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| Position |
complement(948797..949897)
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| AA seq |
366 aa  
MQLPVMPPVQPMLAKSVKGIPDPEKHGGLSFEPKWDGFRCLVFKDGDEVELASRNTKPLT
RYFPEVVAAMREQLPHRCVLDGELFVALPNDAGVERLEFEVLQERIHPARSRIELLAEKT
PASYVAFDLLALDDESYAERPFAERRAALERALGDLDGPCFLTRTTTDPAQAEEWFHQFE
GAGLDGVVAKPLGAAYQQNARTMLKIKHERTADVVVAGYREHKTSTPDRPLLGSLLLGLY
ADGQLQHVGVSASFTAARRAELIEELQPLVVPIADHPWGEWADWAIANPDRVPGTQSRWS
QGKDLSFTPLRPERVLEVAYDHMEGRRFRHTAQFRRWRPDRDPESCGYDQLEEPVGYDLA
RILNVD |
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| NT seq |
1101 nt  +upstreamnt +downstreamnt
atgcagctgccggtgatgccgcccgtccagccgatgctcgcgaagtcggtcaaggggatc
cccgaccccgagaagcacgggggcctgagcttcgagccgaagtgggacgggttccggtgc
ctcgtgttcaaggacggcgacgaggtggagctggccagccgcaacaccaagccgctgacc
cgctacttccccgaggtcgtcgccgcgatgcgcgagcagctgccgcaccgctgcgtgctg
gacggcgagctcttcgtcgcgctcccgaacgacgcgggggtggagcgcctggagttcgag
gtgctccaggagcggatccacccggcccggtcccgcatcgagctgctggccgagaagacg
ccggcctcgtacgtcgcgttcgacctgctcgcgctcgacgacgagtcgtacgccgagcgg
ccgttcgcggagcgtcgcgccgccctcgagcgggcgctgggcgacctcgacgggccctgc
ttcctcacccgcaccaccacggatccggcgcaggccgaggagtggttccaccagttcgag
ggcgccggcctcgacggcgtggtcgccaagcccctgggggcggcgtaccagcagaacgcc
cgcaccatgctcaagatcaagcacgagcgcaccgccgacgtggtcgtcgccggctaccgc
gagcacaagaccagcacccccgacaggccgttgctcggcagcctgctgctcgggctgtac
gccgacggccagctccagcacgtcggtgtgagcgccagcttcaccgccgcccgtcgcgcc
gagctgatcgaggagctgcagccgctcgtcgtgccgatcgcggaccacccctggggcgag
tgggccgactgggcgatcgccaacccggaccgggtgccgggcacccagagccggtggagc
cagggcaaggacctctcgttcaccccgctgcgccccgagcgggtgctggaggtcgcctac
gaccacatggagggacgccggttccgccacaccgcccagttccggcgctggcggcccgac
cgcgacccggagtcgtgcgggtacgaccaactggaggagccggtgggctacgacctcgct
aggatcctgaacgtcgactga |
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