KEGG   Nocardioides sp. JS614: Noca_2246
Entry
Noca_2246         CDS       T00443                                 
Name
(GenBank) Type IV secretory pathway VirD4 components-like protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
nca  Nocardioides sp. JS614
Pathway
nca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Noca_2246
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nca02044]
    Noca_2246
Enzymes [BR:nca01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Noca_2246
Secretion system [BR:nca02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Noca_2246
SSDB
Motif
Pfam: TraG-D_C T4SS-DNA_transf TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ABL81751
UniProt: A1SIW6
Position
2396507..2398027
AA seq 506 aa
MPRPVRGQRSRGGAMKLRFDPWDVGWRIGNAHEPRGGELWVPWDRTAGVIGPQGSGKTLD
LLTPALLGAPGAALVTLTKVEDLLLSLTERSRDDRPCVVLDPFGLAEGVVDELIWDPIAG
CVDPKVAERRAKAFTAGTVKGAITGGTGDDAARFYAAESAKVLQGYFHAAALTGRTLEDV
LQWVANPTAATQPMEILRRHPHAEPFWHGLLHGALNGDDRTAGNTVTTVQQAVSLFFQAD
IRRRCIPSPGRPATDLADVIRRRGTIYLLGREDPYASASPLMTAVAEHVLDTGLLLANSS
PRGGRLCPPLVSVLDELPSTAPLPTLRTRMANERALGLSFIWAAQTRPQLTSIFGEHEAR
ALLGLTNALVMFGGSKDVAFNQEISDLLGTVRIGRVTHSTGGASGGGRSFSGDDIPIMRP
EEVRQLPERQALVVAENGKPIIAKLHRCVEGKAGERLLADQRALRERLTNDRRMVITPEA
RATAALVEARRLGFVDDETDHARSEL
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgcctcgccccgtgcggggacagcgttcccgaggtggcgcgatgaagctgaggttcgac
ccctgggacgtgggctggcgcatcggtaacgcccacgagccgcgaggcggcgagctgtgg
gtcccgtgggaccgcaccgccggcgtaatcggcccgcagggatccggcaagaccctcgac
ctgctcacccctgcactgctcggcgctccgggtgccgccctggtgacactgacgaaggtc
gaggacctgctgctcagcctcaccgaacgctcccgcgacgaccggccctgcgtggtgctc
gaccccttcggcctggccgagggcgtcgtcgacgagctgatctgggacccgatcgccggc
tgcgtagaccccaaggtcgccgagcggcgcgccaaggctttcaccgccggcaccgtcaag
ggcgcgatcaccggcggcaccggcgacgatgctgcgcggttctacgccgccgagtccgcg
aaggtgctgcagggctacttccacgccgcggcgctgaccggtaggacgctcgaggacgtg
ctgcagtgggtcgccaaccccaccgcagccacccagccgatggagatcttgcggcggcac
ccgcacgccgagccgttctggcacggcctcctgcacggtgcgctgaacggtgacgaccgc
accgccggcaacaccgtcaccacggtgcagcaggcggtctcgctgttcttccaggccgac
atccgccgccgctgcattcccagccccggacgtcccgccaccgacctcgccgacgtgatc
cgtcgacgcggcaccatctacctgctcggccgcgaagacccctacgcctcggccagcccg
ctgatgaccgccgtggccgagcacgtcttggacaccggcctgctcctggccaacagctcc
ccgcggggcggccggctgtgcccgcccctggtctcggtgctcgacgagctgccgtcgacc
gcgccgcttccgaccctccgtacccgaatggccaacgagcgcgccctggggctgtcgttc
atttgggccgcccagactcggccccagctgaccagcatcttcggtgagcacgaggcccga
gcactgctcggcctcaccaacgccctggtgatgttcggcggctccaaggacgtcgccttc
aaccaggagatctccgacctcctcggaacggtccgcatcgggcgggtcacccactccacc
ggcggagccagtggcggtgggcgcagcttctccggcgacgacatcccgatcatgcggccg
gaggaagtccggcaactgcccgaacgccaagctctggtcgtcgccgagaacggcaagccg
atcatcgccaagctgcaccgctgcgtcgaaggcaaggcaggggagcgcctgctggccgac
cagcgggcgctgcgcgagcgcctcaccaacgaccggcgcatggtcatcacccccgaggcc
cgagccaccgccgcgctcgtcgaggcgcgccgtctcggtttcgtcgacgacgagaccgac
cacgcaaggagtgaactgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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