KEGG T00443: Noca

Nocardioides sp. JS614: Noca_3385

Entry

Noca_3385 CDS T00443

Definition

D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)

Orthology

K00058

D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]

Organism

nca Nocardioides sp. JS614

Pathway

nca00260	Glycine, serine and threonine metabolism
nca00680	Methane metabolism
nca01100	Metabolic pathways
nca01120	Microbial metabolism in diverse environments
nca01230	Biosynthesis of amino acids

Module

nca_M00020

Serine biosynthesis, glycerate-3P => serine

Class

Metabolism; Energy metabolism; Methane metabolism [PATH:nca00680]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:nca00260]

SSDB

Motif

Pfam:

2-Hacid_dh_C 2-Hacid_dh ACT NAD_binding_2 UDPG_MGDP_dh_C TrkA_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3588017..3589627)

AA seq 536 aa
MTMPAATPADRPVVLIAEELSPATVEALGPDFEIRYCDGADRGELLAALPEADAILVRSA
TKVDAEALAAARRLKVIARAGVGLDNVDVRAATQAGVMVVNAPTSNIVSAAELAVALMLA
AARHISPAHAALKNGEWKRARYTGTELYEKTVGIVGLGRIGVLVAQRLSAFGMKIVAYDP
YVQAGRAAQMGVRLVDLDTLLAEADFMSVHLPKTPETVGLIGADQLAKVKPSLVLVNAAR
GGIVEEAALYAALKEGRVAAAGLDVFAQEPCTDSPLFELENVVATPHLGASTDEAQEKAG
IAVAKSVRLALSGELVPDAVNVQGGVIAEDVRPGIPLTEKLGRVFTAVAGEVALSIDVEV
RGEITDYDVKVLELAALKGIFTDIVEDQVSYVNAPLLAAERGTAVRLVADPESPDHRNLI
TIRGTLADGEQVSVSGTLIGINQKERLVEVNGFDVDLEPTEHLAFLTYEDRPGMVGTVGV
IIGDAGINIAGMQVARDAKGGRALVALSVDTAIPAEVLAEMQHAIDAISVRAVDLV

NT seq 1611 nt +upstreamnt +downstreamnt
gtgaccatgcccgccgccacgcccgccgaccggcccgtcgtactcatcgccgaggagctc
agtccggcgaccgtcgaggcactcggaccggacttcgagatccggtactgcgacggcgcg
gatcgcggcgagctgctggccgcgctccccgaggcggacgcgatcctggtgcggtccgcg
accaaggtcgacgccgaggcgctcgccgcggcccgccggctcaaggtcatcgcccgggcc
ggtgtgggcctggacaacgtcgacgtgcgcgcggcgacccaggcgggcgtgatggtcgtc
aacgccccgacctccaacatcgtctccgccgccgagctcgcggtcgcgctgatgctcgcc
gccgcccggcacatctcgccggcccacgccgcgctgaagaacggcgagtggaagcgggcc
cgctacaccggcaccgagctctacgagaagaccgtcggcatcgtcggcctgggtcggatc
ggcgtcctggtcgcgcagcggctgagcgccttcggcatgaagatcgtggcgtacgacccg
tacgtgcaggctggccgggccgcgcagatgggcgtgcggctggtcgacctcgacacgctg
ctggccgaggccgacttcatgtccgtgcacctgcccaagacccccgagaccgtcggcctg
atcggcgccgaccagctcgcgaaggtcaagccctcgctggtgctggtcaacgccgcgcgc
ggcggcatcgtcgaggaggccgccctctatgccgccctcaaggagggccgggtcgcggcg
gccgggctcgacgtgttcgcgcaggagccgtgcaccgacagcccgctgttcgagctcgag
aacgtcgtcgccacgccgcacctcggcgcctccaccgacgaggcgcaggagaaggccggc
atcgcggtcgcgaagtcggtgcggctcgcgctgtccggcgagctggtccccgacgcggtc
aacgtgcagggcggtgtgatcgccgaggacgtgcgccctggcatcccgctcaccgagaag
ctcggccgggtgttcaccgccgtggccggcgaggtcgcgctgtcgatcgacgtcgaggtg
cgcggcgagatcaccgactacgacgtcaaggtgctcgagctggcggccctcaaggggatc
ttcaccgacatcgtcgaggaccaggtctcctacgtgaacgcgccgctgctcgccgccgag
cgcggcaccgccgtacgcctggtcgccgacccggagagccccgaccaccgcaacctgatc
acgatccgcggcaccctcgccgacggcgagcaggtctcggtcagcggcaccctgatcggg
atcaaccagaaggagcggctggtcgaggtcaacggcttcgacgtcgacctcgagcccacc
gagcacctcgcgttcctcacctacgaggaccggcccggcatggtcggcaccgtcggcgtg
atcatcggggacgccggcatcaacatcgccggcatgcaggtcgcccgcgacgccaagggc
ggccgggccctggtcgcgctgtcggtcgacaccgccatccccgccgaggtgctcgccgag
atgcagcacgcgatcgatgcgatctcggtgcgcgcggtcgacctggtctga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-NCA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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