KEGG   Notothenia coriiceps (black rockcod): 104944972
Entry
104944972         CDS       T04920                                 
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
  KO
K20827  RNA polymerase II-associated protein 2 [EC:3.1.3.16]
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncc01009]
    104944972 (rpap2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104944972 (rpap2)
Enzymes [BR:ncc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     104944972 (rpap2)
Protein phosphatases and associated proteins [BR:ncc01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   104944972 (rpap2)
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     104944972 (rpap2)
SSDB
Motif
Pfam: RPAP2_Rtr1
Other DBs
NCBI-GeneID: 104944972
NCBI-ProteinID: XP_010768887
UniProt: A0A6I9MWY4
Position
Unknown
AA seq 486 aa
YICFYCLLSSQAKFITPTNYKDVVEERFIAKMCAYPICSIKLGKIPTQRYQISTKTNKVY
DITERKCYCSNFCYKASKEFELQISTSPLWLRPHETPPEIKLMKKGDGGSSGEEVRLKVE
RLTEEDIENSAPPEEPLSSEQGPSDGLPYSESSDTEQEQDFVSSVVSQRQGPRVHWGDLP
KRTDEDHKEDEERERRKKREGKIKQESRAEVETDGKKQPSSLRTDTPHVEQAPEEVASVE
EAIAKLNLYNLSETHAAPPPVHSTTKAQHTNLFASLPCEDSNSSTEGKPLPFSTLIKSNH
DGTASNIQPGLNITQVGMSKRGAAGLRDLFKNHAAAAAAAAAAAAAAAQPDSIRLNLLES
LRRTLKEWGTEETLKFLYGTEHSHSATFHGVKEVEEDKEEELDEDDLEDEDDDGGQERPS
AAAPDYQALRQETQQAEIRVREFYKGSRTLPEKKEEQEGNKVREGERRGVNEGCCCESQW
PHEGTV
NT seq 1462 nt   +upstreamnt  +downstreamnt
ttatatttgtttttattgtctcctttcttcacaggcaaaattcataactcctactaatta
caaagatgtcgtagaggagaggttcatcgctaaaatgtgtgcttatccaatatgttcgat
taaactgggcaagatcccaactcaaaggtatcaaatatcgacaaagaccaataaggtgta
cgacatcacagagcgtaagtgttattgcagtaacttctgctacaaagcctccaaagagtt
tgagctacagatatccacttcacctctgtggctcaggccgcacgagactcctccagaaat
taaattgatgaagaaaggagatggcgggagttctggtgaggaggtgaggctgaaggtaga
gcgtctgacagaggaagacattgaaaattctgccccccctgaggagccccttagctctga
gcagggtccttcagacggcctcccctacagtgagagcagcgacaccgaacaggagcagga
ctttgtctccagcgtggtgtcccagaggcagggacccagggtgcactggggcgacctgcc
taaacgcacagatgaagaccacaaagaagatgaagagagggagaggagaaagaaacggga
ggggaaaataaaacaggaatcacgagcagaagttgaaactgatggtaaaaaacagccgtc
atctttacgcacagacacacctcatgtagagcaggcaccagaggaagtagccagtgtgga
agaggctatagctaagctgaatttatacaacttatctgagactcacgctgctcctccacc
tgttcactcaacaacgaaagcacaacatacaaatctttttgcttctctaccttgtgaaga
ctcaaacagctcaacagaaggcaaacccctccccttttccaccctgatcaagagtaatca
tgatggtacagcatcgaacatccagccaggcctcaacatcacccaggtggggatgagcaa
gagaggtgctgccgggcttcgagacctctttaaaaaccacgctgctgctgctgctgctgc
tgctgctgctgctgctgctgctgcccaacccgactccatcaggctcaacctgctggagag
cctgaggagaacgctgaaggagtggggcaccgaggagacgctgaagttcctgtacggcac
tgaacactcacacagcgcaactttccatggtgtaaaagaagtagaagaggataaagagga
ggagctggacgaagacgaccttgaggatgaggatgatgatggggggcaggagagaccgtc
tgctgcagctccagactaccaggcgctgaggcaggagacccagcaggcggagatcagagt
cagggagttctataaaggcagccggactctacctgagaagaaggaggagcaggaaggaaa
caaggtgagggaaggcgagaggaggggtgttaatgaagggtgttgttgtgagagtcagtg
gccacatgaaggcactgtatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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