KEGG   Notothenia coriiceps (black rockcod): 104948981
Entry
104948981         CDS       T04920                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104948981
   04121 Ubiquitin system [BR:ncc04121]
    104948981
Enzymes [BR:ncc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104948981
Membrane trafficking [BR:ncc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104948981
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104948981
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zinc_ribbon_9 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-ANAPC11 HypA zf-Nse zinc-ribbons_6 Rad50_zn_hook
Other DBs
NCBI-GeneID: 104948981
NCBI-ProteinID: XP_010773535
UniProt: A0A6I9NGE5
Position
Unknown
AA seq 311 aa
MAEAPPRPCRFFCHRCSAEISPRLPDYTCPRCDSGFIEELSEERSTDNGSASTSSSSDQN
RPAFESMDHQQLFTFPSGYGPFALGIFDENFDLRTRLPTEDNRETENRREREMASRQRYS
ARQPRGRHVPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNMGMGPWGMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKSLPTVTITEEHVGACLECPVCKEDYSVEEN
VRQLPCNHLFHNACIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMSFSPSSSSSSSPS
SPNNENAARNS
NT seq 936 nt   +upstreamnt  +downstreamnt
atggctgaagctcccccacggccctgccggtttttttgtcaccggtgttccgcagaaatc
agcccgcgcctaccggactacacctgtccacgctgtgattcaggtttcattgaggagctt
tctgaggaaagaagtactgataatgggtccgcatccacgtcctccagcagcgatcagaac
cgcccagcctttgagagcatggatcaccaacaattgttcacattcccctctgggtacggt
ccatttgcacttgggattttcgatgaaaacttcgaccttcgaacgcggctacccacagag
gacaacagagagacagaaaacaggagggaaagggaaatggcatcgcggcaacgatacagt
gcacggcaaccgcggggtcgacatgttcctcgaagacagggtacgcgccatgaaggagtg
cccacattagaggggattattcagcagttagtaaatggaataatagcacctaccgccatg
ccaaatatggggatgggaccatggggtatgctacattctaatccaatggattacgcgtgg
ggagccaatggacttgatgctatcattacacagttattgaaccagtttgaaaacacgggc
ccgcctcctgcagacagggaacggataaagagtttacccacagtgaccatcacagaggaa
catgtgggtgcttgtttagagtgccctgtgtgcaaagaagactacagcgtggaggagaat
gttagacagctgccttgcaatcatctgtttcacaatgcctgtatagtgccatggctggaa
cagcatgatacctgtcctgtctgcaggaagagtctaagtggacagaacacggccacagac
ccacccgggttatcaggaatgagcttctctccttcatcctcctcctcttcctcccctagc
tctcctaacaatgagaatgctgccagaaactcttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (34)   

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