KEGG   Notothenia coriiceps (black rockcod): 104953376
Entry
104953376         CDS       T04920                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03008  Ribosome biogenesis in eukaryotes
ncc03013  Nucleocytoplasmic transport
ncc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104953376 (ran)
   03008 Ribosome biogenesis in eukaryotes
    104953376 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104953376 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104953376 (ran)
   03009 Ribosome biogenesis [BR:ncc03009]
    104953376 (ran)
   03016 Transfer RNA biogenesis [BR:ncc03016]
    104953376 (ran)
   03036 Chromosome and associated proteins [BR:ncc03036]
    104953376 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104953376 (ran)
   04031 GTP-binding proteins [BR:ncc04031]
    104953376 (ran)
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     104953376 (ran)
Ribosome biogenesis [BR:ncc03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    104953376 (ran)
  Pre-60S particles
    104953376 (ran)
Transfer RNA biogenesis [BR:ncc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    104953376 (ran)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     104953376 (ran)
   Spindle formation proteins
    104953376 (ran)
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104953376 (ran)
GTP-binding proteins [BR:ncc04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    104953376 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 G-alpha Gtr1_RagA RNA_helicase ArgoMid Pox_A32 AAA_24 TsaE AAA_7 AAA_16 Septin DUF5906 DUF5935
Other DBs
NCBI-GeneID: 104953376
NCBI-ProteinID: XP_010778616
UniProt: A0A6I9NVR9
Position
Unknown
AA seq 219 aa
MADSMAQCVPVATFKLVLVGDGGTGKTTFVKRHITGEFEKKYVATLGVEVHPLMFHTNRG
PIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPI
VLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV
AMPALAPPEVQMDPNLAAKYEEELQVASQTALPDEEDDL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcggactcaatggcacagtgtgttccagtggccacgtttaagctcgtcctggtagga
gatggaggcacaggaaaaacgacttttgtgaaaaggcacatcacaggagagtttgagaag
aaatatgttgcaactctgggagtagaggttcacccactgatgttccacaccaacagagga
cccatcaagtacaatgtgtgggacacagctggtcaggagaagttcggaggcctgagagac
ggctattacattcaagctcagtgtgctatcatcatgtttgacgtcacctctcgagtcacc
tataagaacgtgcccaactggcatcgtgatctggtccgtgtctgtgagaacattcccatc
gtcctttgcggcaacaaagttgacatcaaagacaggaaagtcaaagccaagagcattgtg
tttcatcgtaagaagaacctgcagtactacgatatttcagccaagagtaactacaacttc
gagaaacctttcctgtggttagcaaggaagttaatcggtgaccccaacctggagtttgtg
gccatgcccgccctcgctcccccagaggtccaaatggaccccaaccttgctgcgaagtac
gaagaagagcttcaagttgcatcacaaacagcgctcccagacgaagaagatgacctttaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (95)   
   KEGG ORTHOLOGY (1)   
   RefGene (91)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (126)   

Download RDF
DBGET integrated database retrieval system