KEGG   Notothenia coriiceps (black rockcod): 104953913
Entry
104953913         CDS       T04920                                 
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03030  DNA replication
ncc03410  Base excision repair
ncc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104953913 (fen1)
   03410 Base excision repair
    104953913 (fen1)
   03450 Non-homologous end-joining
    104953913 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncc03032]
    104953913 (fen1)
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104953913 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104953913 (fen1)
DNA replication proteins [BR:ncc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    104953913 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     104953913 (fen1)
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     104953913 (fen1)
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104953913 (fen1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 104953913
NCBI-ProteinID: XP_010779258
UniProt: A0A6I9NWP5
Position
Unknown
AA seq 380 aa
MGIHGLTKLIADQAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNLLQNEDGET
TSHLMGMFYRTIRMLEYGIKPVYVFDGKPPQLKSVELEKRGERRAEAEKQLAQAQEMGEQ
ENIDKFTRRLVKVTKHHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFGTATEDM
DGLTFGTNILLRHMTASEAKKLPIQEFHFSRILQDIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDTKKHPPPEDWLYREARALFLNAEVVDCTTVDLKWGE
PDEEGLIQYMCSEKQFSEDRIRNGCKKISKSRQGSTQGRLDSFFSVTGSLSSKRKEPELK
GSAKKKQKTGATPGKFKKGR
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacgggcttactaaactgatcgctgatcaggcccccggtgccatcaaagag
caagacatcaagaactactttggtaggaaaattgcaatagatgcctccatgtgtatctac
cagttcctgatcgctgtgagacaggacgggaacctactgcagaatgaggatggcgagacg
acgagccacctgatgggaatgttctaccggacgatccgcatgctggaatatggaatcaaa
cctgtgtacgtgtttgacggaaagcccccacagctcaagtcagtagagttggagaagcga
ggggagaggagggcggaagctgagaagcagctcgctcaagctcaggaaatgggggagcaa
gagaatatcgacaaattcaccaggcgtctggtaaaagtgaccaagcatcataacgacgag
tgcaagaagctgctgaccctgatgggagtgccctacgttgaggctccgtgtgaggcggag
gccagctgtgctgctctggttaaagcagggaaggtgtttggaacagcaacggaggatatg
gacgggctgacctttgggacaaatatcctgctcagacacatgaccgccagtgaagcaaag
aaacttcctatccaggagttccacttcagtcgcatcctgcaggacatcggcctcaccaat
gaacagttcatagacctgtgtatccttctgggctgtgactactgtggcaccatcaaggga
atcggtcccaagagggccatcgatctgatcaagcagcacggcagcattgaggagatcctg
gaaaacatcgacaccaagaagcacccccctccagaggactggctgtatagagaggccaga
gctttgtttttaaatgcagaagtggtggattgtaccactgtggatctgaagtggggggag
ccggatgaggaggggctgatccagtacatgtgtagcgagaaacagttcagcgaggacagg
atccgtaacggctgtaagaagatctccaagagccgacagggcagcactcagggacgactc
gactctttcttcagcgtcaccgggtctctgtcctccaagcggaaggaacctgagcttaaa
ggatctgcaaagaagaagcagaagaccggagccacgccgggcaaattcaagaaggggaga
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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