KEGG   Notothenia coriiceps (black rockcod): 104956548
Entry
104956548         CDS       T04920                                 
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104956548 (ogg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncc03400]
    104956548 (ogg1)
Enzymes [BR:ncc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     104956548 (ogg1)
DNA repair and recombination proteins [BR:ncc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     104956548 (ogg1)
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HHH_5
Other DBs
NCBI-GeneID: 104956548
NCBI-ProteinID: XP_010782345
UniProt: A0A6I9P4B9
Position
Unknown
AA seq 203 aa
MIKSLSVSSESSLPSPEDDSDSVCSDELLGSQSRRWLADLLTGDLPAENEDVKLVGRNGL
FVDYHFPLGELELQAVVKWKRPVLADTSVEARLRDLGFGYRARFLQQSAKQILDSHGIQW
LEGLRSAPYLQARDALRTLPGVGTKVADCVCLMSLDKAEAVPIDTHVWQIAKRDYNYGSG
NGQKTITDKLHRDIGTVDSHVLR
NT seq 612 nt   +upstreamnt  +downstreamnt
atgataaagtcactgagtgtgtcgtccgaatcctccctgccctccccggaggatgactcg
gactcggtgtgctccgacgagctgctgggctctcagtcccgccgctggctggcggacctc
ctgaccggggacctgcccgcggagaacgaggacgtgaagctcgtcggccggaacgggctg
ttcgtggactaccacttccccctgggagagctggagctgcaggccgtggtcaagtggaag
cgaccagtgttggcagacaccagcgtagaggcacggctcagggatcttggttttgggtac
agggctcggttccttcagcagagcgctaagcagattttagactctcatgggatccagtgg
cttgaaggtttgcgcagtgccccatatctgcaggcccgtgatgctttgcgcacccttcct
ggtgtcggcaccaaggtggcagactgtgtttgtctgatgtccctggataaggcagaggcc
gtgcccatagacactcacgtgtggcagattgctaaacgtgactacaactatggatctggc
aacggacagaagactatcacagataaacttcatagagatattggtacggtagatagtcat
gtacttcgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system