KEGG   Notothenia coriiceps (black rockcod): 104958709
Entry
104958709         CDS       T04920                                 
Name
(RefSeq) syntaxin-3-like
  KO
K08486  syntaxin 1B/2/3
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    104958709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104958709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104958709
Membrane trafficking [BR:ncc04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    104958709
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   104958709
  Exosomal proteins of other body fluids (saliva and urine)
   104958709
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 Synaptobrevin Orf78 DUF334 T2SSF DUF1687 Tlp DUF3899 DUF6584 DUF2970 DUF2207_C Amnionless
Other DBs
NCBI-GeneID: 104958709
NCBI-ProteinID: XP_010784782
UniProt: A0A6I9P9C4
Position
Unknown
AA seq 227 aa
MGKDSKEVKQETQDDLEAITNDIKKMANNARNKLKTIERNLESEEQERVSADIRIRKSQH
AVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDDELEEMLESGNSAVFAAG
IVDAGVSKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDSIDNIEQNVAKSE
DHITEAREQTKKAIRHQGKARKKMIIIGVVCAVVLVILLIIILTQTV
NT seq 684 nt   +upstreamnt  +downstreamnt
atgggaaaagatagtaaggaggtgaaacaggaaacgcaggatgacttggaggcaatcacc
aatgacataaagaagatggccaacaatgcaagaaacaaacttaagaccatcgagaggaat
ctggagtcagaggagcaggaaagggtgtcggctgacattcggatacgtaaatcacagcat
gcagtgctgtccaggaagtttgtggaggtaatgacaaagtataatgaagcccaggtggac
ttcagggagaggagtaaaggacgtattcagagacaactagagatcactggaaaagcaaca
acagatgacgaactggaggagatgttggagagcggcaattctgcggtgtttgctgcaggg
atcgtggatgctggggtctctaaacaagctctgagtgagattgaagccagacacaaagac
attgtccgtctggaaagtagcatcaaggagctgcacgatatgtttgtagacatcgccatg
ctggtggagagccagggtgacagtattgacaacatagagcagaatgtagccaagtcagag
gaccatataacagaggctagggaacagaccaagaaggctataaggcatcagggcaaagca
cgcaagaagatgatcataattggtgttgtctgtgctgtggtccttgtcatcctcctcatc
atcatcctcacacagacagtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system