KEGG   Notothenia coriiceps (black rockcod): 104961283
Entry
104961283         CDS       T04920                                 
Name
(RefSeq) polyadenylate-binding protein 1-A
  KO
K13126  polyadenylate-binding protein
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03015  mRNA surveillance pathway
ncc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104961283
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104961283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104961283
   03041 Spliceosome [BR:ncc03041]
    104961283
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104961283
   mRNA cycle factors
    Stress granule specific factors
     104961283
Spliceosome [BR:ncc03041]
 Complex C
  Other components
   Complex C specific factors
    104961283
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM RRM_5 RRM_3
Other DBs
NCBI-GeneID: 104961283
NCBI-ProteinID: XP_010787853
UniProt: A0A6I9PL97
Position
Unknown
AA seq 246 aa
MNPSAPSYPMASLYVGDLHADVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPNDAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAREFTNVYIKNFGDDMDDVKLRELFNQYGPSLSIRVMTDDSGKSKGFGFVSFER
HEDAQK
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaatcccagcgctcctagctacccgatggcttccctctatgtgggagatctgcatgca
gacgttaccgaggctatgctctacgagaaattcagcccggctgggcccatcttatccatc
agagtgtgcagagacatgatcacacgccggtctcttggctatgcatatgtcaacttccag
cagccgaatgacgctgagcgagccctggacacaatgaactttgatgtaatcaaaggcaga
ccactccgcatcatgtggtctcagcgggatccctccctaagaaaaagtggtgtgggcaac
atcttcatcaagaacctggacaagtctattgataacaaagcactctatgacaccttctct
gcatttggaaacatcctctcttgcaaggttgtttgtgatgagaatggctcaaaggggtac
ggctttgtccactttgagacccacgaggctgctgagcgggccattgagaaaatgaatggc
atgttgctcaatgacagaaaagtatttgttggacgctttaagtctcgtaaagaaagggag
gctgagcttggagcccgtgccagagagtttaccaatgtttacatcaagaactttggggat
gacatggatgacgtgaagctgagggagttgtttaaccaatatggaccttcactaagtatc
cgggttatgactgatgacagtggcaagtctaagggatttggcttcgtcagctttgagaga
catgaagatgcacagaag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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