KEGG   Notothenia coriiceps (black rockcod): 104964841
Entry
104964841         CDS       T04920                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04010  MAPK signaling pathway
ncc04060  Cytokine-cytokine receptor interaction
ncc04150  mTOR signaling pathway
ncc04210  Apoptosis
ncc04217  Necroptosis
ncc04350  TGF-beta signaling pathway
ncc04620  Toll-like receptor signaling pathway
ncc04621  NOD-like receptor signaling pathway
ncc04622  RIG-I-like receptor signaling pathway
ncc04625  C-type lectin receptor signaling pathway
ncc04920  Adipocytokine signaling pathway
ncc05132  Salmonella infection
ncc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104964841
   04350 TGF-beta signaling pathway
    104964841
   04150 mTOR signaling pathway
    104964841
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    104964841
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    104964841
   04217 Necroptosis
    104964841
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    104964841
   04621 NOD-like receptor signaling pathway
    104964841
   04622 RIG-I-like receptor signaling pathway
    104964841
   04625 C-type lectin receptor signaling pathway
    104964841
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    104964841
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104964841
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104964841
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncc04052]
    104964841
   00536 Glycosaminoglycan binding proteins [BR:ncc00536]
    104964841
Cytokines and neuropeptides [BR:ncc04052]
 Cytokines
  Tumor necrosis fators
   104964841
Glycosaminoglycan binding proteins [BR:ncc00536]
 Heparan sulfate / Heparin
  Cytokines
   104964841
SSDB
Motif
Pfam: TNF T4SS_pilin TMEM61
Other DBs
NCBI-GeneID: 104964841
NCBI-ProteinID: XP_010792026
UniProt: A0A6I9Q2Y6
Position
Unknown
AA seq 253 aa
MVAYTSAPSDMEMGLEQRTVVLVEKKSSTERILKLSVALLVVALCVGGILVFAWYWSGRP
DNMTQPGHTDALIDKDTAEKTDPHTTLKRFSSKAKAAMHLEGIYEEGESLKDQLEWRSGQ
GQAFAQGGFRLVNNQIVIPQTGLYFVYSQASFRVSCSDGDEEGAGKGLTPLSHRIWRYSD
SISSKASLMSAVRSACQNTAQVDSYRDGQGWYNAIYLGAVFQLNRGDRLWTETNQLSELE
TDEGRTFFGVFAL
NT seq 762 nt   +upstreamnt  +downstreamnt
atggtggcctacacatctgcaccaagtgacatggagatgggtcttgagcagaggacggtg
gtcttggtagaaaagaagtcctccacagaacggatattaaagttgtctgtggcccttctt
gtcgtggccctttgcgtagggggcatcctagtgtttgcttggtactggagtggaaggcca
gacaacatgacgcaaccaggccacacagatgcgctgatcgacaaggacacagctgagaaa
acagatccccacaccacactgaagcgattcagcagcaaagccaaggcagccatgcatcta
gaagggatctacgaagaaggtgaaagtttgaaagaccagttggagtggagaagcggtcaa
ggtcaagcgttcgctcagggcggctttcgactggtgaacaaccagatagtaatcccacaa
acaggactgtacttcgtctacagccaggcgtcgttcagagtgtcctgcagcgatggcgac
gaggagggagcgggtaaaggcctcacacctctcagccacaggatctggcgctactcagac
tccattagcagcaaagcctctctgatgagcgccgtgaggtcggcttgccaaaacacggca
caggtggacagctacagagatggacaggggtggtacaacgccatttatctgggcgcagtg
tttcagctgaacagaggagaccgactgtggacggaaaccaaccagctatcagagctggag
accgacgagggacggaccttctttggtgtgtttgcactttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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