KEGG   Notothenia coriiceps (black rockcod): 104965966
Entry
104965966         CDS       T04920                                 
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta
  KO
K12897  transformer-2 protein
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104965966 (tra2b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncc01009]
    104965966 (tra2b)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncc03041]
    104965966 (tra2b)
Protein phosphatases and associated proteins [BR:ncc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104965966 (tra2b)
Spliceosome [BR:ncc03041]
 Common components
  Common spliceosomal components
   SR proteins
    104965966 (tra2b)
SSDB
Motif
Pfam: RRM_1 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 104965966
NCBI-ProteinID: XP_010793341
UniProt: A0A6I9Q450
Position
Unknown
AA seq 296 aa
MSDNEKEFREQDSQPGSRSASPQGSAKSSSRSPVRSKDGSRRSRSRSRSRSKSRSRSHRS
SRRHHSRSRSRSHRRRSRSRSRSWEYRRHRSHSRSPMSNRRRHIGNRANPDPNNCLGVFG
LSLYTTERDLREVFSKYGPLSAVNIVYDQQSRRSRGFAFVYFETREDSKEAKERANGMEL
DGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGSGGSGGGGGGSSSSSGGGGGSSSQRNSR
DCDRGSVRGYDRSYDRDYERYDDREYRSYKRRSPSPYYSRGYRSRSRSRSYSPRHY
NT seq 891 nt   +upstreamnt  +downstreamnt
atgagcgacaacgagaaagaatttagggagcaggactcacagcctggctcgaggagtgcg
tcccctcagggctctgctaaatcctccagccgctcaccggtacgctcaaaagatggctcc
cgccgctccaggtccagatcccgatctcgatccaaatccaggtcccggtcccatagaagc
tcacgtagacatcactcccgctctcgttcccgttctcaccgacgccgttccaggagccga
tctcgtagctgggagtaccgccggcacaggagccacagccgttcacccatgtcaaatcgt
cgcagacacattggcaacagggccaacccagaccctaacaactgtctgggtgtgtttggg
ctgagtctgtacaccactgagagggatctgagggaggttttctcaaagtacggccctttg
agtgccgttaacattgtgtacgaccagcagtcacgtcgctctaggggctttgccttcgtc
tactttgaaacccgtgaggactctaaggaggccaaggagcgtgccaacgggatggagctt
gatgggcgcaggatcagagtagatttctccatcacgaaaagagcccatacacccacacct
gggatatacatgggacgaccaacatatggcggtggcagtggcggtagcggaggaggtggt
gggggcagcagtagtagcagtggtggtggtggtgggtcatcatcgcagcgtaactcaagg
gactgcgacaggggctccgtcaggggctatgacagaagttatgatcgtgattatgaacgc
tatgacgacagagagtacagatcatacaaacgcagatctccatctccttactacagcaga
gggtatcgctcacgatcccgatcccggtcctactcgccacgtcactactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (107)   
   KEGG ORTHOLOGY (1)   
   RefGene (103)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (117)   

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