KEGG   Notothenia coriiceps (black rockcod): 104965974
Entry
104965974         CDS       T04920                                 
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    104965974 (gabra1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ncc04040]
    104965974 (gabra1)
Ion channels [BR:ncc04040]
 Ligand-gated channels
  GABA-A
   104965974 (gabra1)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N
Other DBs
NCBI-GeneID: 104965974
NCBI-ProteinID: XP_010793351
UniProt: A0A6I9PY80
Position
Unknown
AA seq 468 aa
MKGPHIATMGGRSRTAFLCLWASLLVANSVLGGKSSGTNGMTDEQKDNTTVFTKILDSLL
DGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHEMEYTIDVFFRQSWKDERLKFKGPMAV
LRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHL
EDFPMDAHACPLKFGSYAYTQAEVVYVWTRGADQSVVVAEDGSRLNQYDLMGQHVNSGVV
QSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV
LTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVV
PEKQKKKKESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPLPSEPKEEPKPKP
PEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKNPKLTGMGH
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaaaggtcctcatattgcaactatgggtggacggagcaggacggcctttctgtgtctg
tgggcttccttacttgtggccaacagcgttctaggtgggaaaagctctgggacgaacggc
atgacagatgaacagaaagataacactacagtgttcaccaagatcttagacagccttcta
gatggctatgacaatcgcctcaggccaggactgggagagcgtgtaactgaagtcaagact
gacattttcgtgactagtattgggccagtttcggatcatgagatggagtacactattgat
gtcttcttcagacagagctggaaggatgaaaggttaaagttcaaaggccccatggccgtg
ctacgtctcaacaacctgatggccagcaagatctggacccccgataccttcttccacaac
ggcaagaagtccgtggctcacaacatgaccatgccgaacaagctgctgcgaattacagag
gaaggaactctgctgtacaccatgaggcttacagtaagagcagaatgtcccatgcacctg
gaagacttcccgatggatgcccatgcttgtccactgaaatttggcagctatgcctacact
caagcagaggtggtgtatgtgtggaccagaggggccgaccagtccgtggtggtggcggag
gatgggtccagattaaaccagtacgatctgatggggcagcatgtgaattctggtgtggtg
cagtccagcacaggagagtatgtcgtgatgacaacccacttccacctgaagaggaaaatt
ggttactttgtgatccagacatatctaccctgcatcatgacagtcatcctctcccaagtg
tctttctggctcaacagagagtctgtccctgccaggactgtctttggagtgaccactgtc
ctgaccatgaccactctcagtatcagcgccaggaactccctccctaaagtggcctatgcc
acagctatggactggttcatcgctgtgtgctacgcctttgtcttctcggctctcattgag
tttgccacagtcaactacttcaccaagaggggttatgcctgggatggaaaaagtgtggtg
ccagagaagcaaaagaagaagaaggagtccctcctcaagaaaaacaacaccacagcctac
ccagctgccactgctacagccttcgcccccaatattgccagggaccctggattggccact
attgccaaaagcgcccccccactcccctctgagcccaaggaggagccaaagcccaaacct
ccagaggcaaagaagacctttaacagtgtgagcaagatagacaggattgccagaatagcc
ttcccattgctctttggaacctttaacttggtctactgggcaacttacttgaataagaac
cccaaattaacggggatgggtcactaa

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