KEGG   Notothenia coriiceps (black rockcod): 104968026
Entry
104968026         CDS       T04920                                 
Name
(RefSeq) circadian locomoter output cycles protein kaput-like isoform X1
  KO
K02223  circadian locomoter output cycles kaput protein [EC:2.3.1.48]
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104968026
   03036 Chromosome and associated proteins [BR:ncc03036]
    104968026
Enzymes [BR:ncc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     104968026
Transcription factors [BR:ncc03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    104968026
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    104968026
SSDB
Motif
Pfam: PAS_11 PAS_3 HLH PAS PAS_9
Other DBs
NCBI-GeneID: 104968026
NCBI-ProteinID: XP_010795866
UniProt: A0A6I9Q6M3
Position
Unknown
AA seq 926 aa
MTSSIGDDCSIFDGLMEEDEKDKAKRFDRSVSRNKSEKKRRDQFNVLIKELGTMLPGNTR
KMDKSTILQKSIDFLCKHKEIAAQSESSEIRQDWKPPFLSNEEFTQLMLEALDGFFIAIM
TDGNILYVSESVTSLLEHLPTDLVDQNLLNFLPLGEHSDVYKELSTHPTEHDNLSSDYQK
TKNHMEFCCHMLRGAIDPKEPPVYEYVKFIGNFKSLNNVPNVTRNGLAGVLQRSLQPAFD
DKVCFVATVRLAKPQFIKEMCTVEDPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLG
TSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRP
EFIVCTHTVVSYAEVRAEQRRELGIEESNPEGTVNKSQDSESESQLNTSSLKEALERFDR
SRTPSESSQSSQKSSSHVSDNTCTSSKLHMDTATPPLQSLASTMVMTSQRRSSISSQSMS
SQTTSQSVTPGMIPQQQQQQQQQQQQQQQQQQPQPEQQQPQQLQANVQPVMEFSAQVNAM
QHLKDQLEQRTRLIQANIQRQQDELRHIQDQLQRVQGQGIQMLLQQPGGAMNVQLPQTGS
VQQTANLTNHVQQTTINPVHSGTQQLTIQQQAPPPQQNLQQQQQTNALTQEFISCPSLLP
HITTLQPQRQPQQPPQAQPQTQGSVSAPLYNTMMISQPGQPNMLQISTSLPQTNTQQGTT
VATFTQDRQIRFPAGQQLVTKLVTAPMACGAVMVPTSMFMGQVVTAFNPFGGQQQGGQTQ
TLTLQPAQPPQGQPDGQNQTTVVAQGGQQGQQQQQQFLQGTRLLHSNQSTQLILQAAFPL
QQQGTFTQATHQQQQTQQPQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQQSHHQRHQQ
QLKPQPQKPQKAPTSHRTESVSSQPQ
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgacatcaagcataggggatgattgtagcatctttgatgggttgatggaagaagatgaa
aaggacaaagcaaaacgtttcgatcgtagcgtgtcccgtaacaagtctgagaagaagcgg
agagaccagttcaatgtcctcatcaaggaactcggcacgatgttaccgggcaacaccagg
aagatggacaagtccaccatcctgcagaaaagcatcgacttcctgtgcaaacacaaagag
attgcagcccagtcagagtccagtgagatcaggcaagactggaagcctccgtttcttagc
aatgaggagttcacccagctcatgctggaggctctggatgggttttttatagcaatcatg
actgatgggaacatcctctacgtctctgagagtgtcacctcactacttgaacatctaccg
actgacttggtggatcagaacctgttaaacttcctgccactcggggaacactctgatgtg
tacaaggagctgtccacacaccccaccgaacacgacaaccttagctccgattaccaaaag
acgaagaaccacatggagttctgctgtcatatgctgcgaggggccattgacccgaaagaa
ccgcctgtctacgagtatgtcaagttcattggcaacttcaagtcactcaacaatgttccc
aacgtgacgaggaatggtctggcaggggtgttacagcgctctctgcagcctgcgttcgac
gacaaggtgtgcttcgtagccacagttcggctggccaaacctcagttcatcaaggaaatg
tgtacagtggaggatcctaatgaagaattcacctcgaggcacagtctagaatggaagttc
ctcttcttagaccacagagctccaccaatcataggctacctgccgttcgaggttctggga
acatcagggtacgactattaccatgtggacgacctggagacattagccaagtgtcacgaa
cacttgatgcagtacggtaaagggaagtcttgctactatcgtttcctgactaaaggtcaa
cagtggatctggctccagacgcattactacataacttatcaccagtggaactctcgacct
gagtttatcgtctgtacgcacacagtagtcagctatgcagaggtgagggcagagcagcgc
agagagctgggcattgaagagtccaacccagaagggactgtgaataagagtcaggactca
gagtcagagtcacagctgaatacgtccagcctcaaggaggctctggagcgatttgatcgc
agccgaacgccctcagaatcctcacaaagttctcagaagtcctcgtcgcacgtctctgac
aatacttgcacctcctctaagctacacatggacacggccacacctcctctgcagtccttg
gcctccaccatggtgatgacgtcacagcgtcgctcgtccatcagcagccagtcgatgagc
tctcagaccacgagccagagtgtaactccagggatgatccctcagcagcagcaacaacag
caacaacaacagcagcaacaacagcaacaacaacaaccacaaccagagcaacaacaaccc
cagcagctacaggcaaacgtacagccggtgatggagttctcggcgcaggtgaatgccatg
cagcatcttaaagatcagctggaacagaggacaagactaatccaagctaacatccagcgg
cagcaggacgagctgaggcacatccaggaccagctgcagagggtgcagggacagggcata
cagatgttgctgcagcagccggggggagcgatgaacgtgcagctccctcagacggggtcg
gtccaacaaacggctaatttgaccaaccatgtccagcaaacaacaattaaccccgtccat
tcaggaactcagcagctcaccatccagcagcaggccccgcccccccagcagaacctacag
cagcagcagcagaccaatgccctcacacaggaattcatatcatgtccctccctccttccc
cacattaccaccctccagccccagcgtcagccccaacaacctccgcaggctcagccccag
acccagggctccgtctctgctccgctctacaacaccatgatgatctcccagcccgggcag
cccaacatgctgcagatcagcaccagcctgccgcagaccaacacacagcaaggcacaacg
gtggctaccttcacacaggaccgacagatccgcttcccagcagggcagcagctggtgacc
aagctggtgacagcgccaatggcatgtggagcagtgatggtgcccacctccatgttcatg
gggcaggtggtcactgccttcaacccctttggtggtcaacagcagggggggcagacacag
accctgaccctgcaaccagcccagcccccccaaggtcagcccgacggccagaaccagacc
actgtagtggctcagggtggccagcaggggcagcagcaacagcagcaattcctacagggc
actcgtcttctccacagtaaccagtccacccagctgattctacaggcagctttcccactc
caacaacagggcactttcacacaggcaactcaccaacaacagcaaacacagcaaccacag
caacaacagcaacaacaacaacaacaacagcaacaacaacaacagcaacaacaacagcag
cagcaacggcagcaacaacagcagcagcagcaacaatcccaccaccagaggcaccagcag
cagctgaagccccagccccagaaaccacagaaagccccgacgtcacacaggactgagagt
gtcagcagccagccgcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system