KEGG   Neurospora crassa: NCU06646
Entry
NCU06646          CDS       T01034                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
ncr  Neurospora crassa
Pathway
ncr03022  Basal transcription factors
ncr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NCU06646
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCU06646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncr03021]
    NCU06646
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU06646
Transcription machinery [BR:ncr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     NCU06646
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     NCU06646
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 3877017
NCBI-ProteinID: XP_960879
UniProt: Q8X0V0
Position
V:4110771..4111908
AA seq 72 aa
MPRAIRGVLIQCEPAIKSIIVHLDSVNNDIIIEDLDEQTLVVKENMVQLLKQKLEDRLKE
TYRPEEPLADSD
NT seq 219 nt   +upstreamnt  +downstreamnt
atgccgagagcaatcagaggtgtactcatccagtgcgaaccagccatcaagtccatcatc
gttcacttggatagtgttaacaacgatatcatcatcgaagatcttgatgagcagaccctg
gttgttaaggaaaacatggtgcaactgctcaaacagaaactcgaggaccgcctgaaggaa
acatacaggcccgaggaaccgctggcagatagtgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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