KEGG   Candidatus Nitrosomarinus catalina: NMSP_0670
Entry
NMSP_0670         CDS       T04846                                 
Symbol
tfb_2
Name
(GenBank) Transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nct  Candidatus Nitrosomarinus catalina
Pathway
nct03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NMSP_0670 (tfb_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nct03021]
    NMSP_0670 (tfb_2)
Transcription machinery [BR:nct03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NMSP_0670 (tfb_2)
 Prokaryotic type
  Archaeal type
    TFB
     NMSP_0670 (tfb_2)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N HTH_11 HTH_Crp_2 HTH_AsnC-type Ribosomal_L37e HTH_3 RB_B zinc_ribbon_2 DZR
Other DBs
NCBI-ProteinID: ARS64291
UniProt: A0A2Z2HJL0
Position
551040..551969
AA seq 309 aa
MVAANSTPSCLRCGKNSLLTDDVTGEQFCSKCGYVVSEKSQESGPEWRSFQKDGGADPAR
TGAPSSLMIHDMGLSTVINPLNKDASGKPLSTSMKSTIERLRTWDSRSQVHEPVDRNLRQ
ALSDLNKLKDKVSVPANVLEKAAYIYRKALEKKLVRGRSISAMIAASLYAACRDTETPRT
LKDIADSANVKRKDIARCYRLLHHELELKMPVVDSIQCIARISSKLEISEKTKRYAVKVL
KEAQERKESAGKDPMGLAATALYLSCVKNGVSITQRDLAEAAGVTEVTIRNRYKGLKADQ
APKTEDSSE
NT seq 930 nt   +upstreamnt  +downstreamnt
atggttgctgccaattcaacacccagttgtttacgttgtggaaaaaattctcttcttact
gatgatgttactggagaacagttttgttcaaaatgtggttatgtagtttcagaaaaatct
caagaatcaggacctgagtggagatcatttcaaaaagatggtggcgcggatccagctaga
acaggtgccccttcatcattaatgatacatgacatgggattgtccactgtaattaatccg
ttaaacaaagatgcatctggaaaaccattatcaacttcaatgaaaagtacaatcgaacgt
cttagaacttgggatagtagaagtcaagttcatgaacctgttgatagaaatcttagacaa
gcacttagtgatttaaataaattaaaagataaagtttcagttcctgcaaatgttcttgaa
aaagcagcttacatttacagaaaagcattagagaaaaaattagttagaggccgttccatt
tctgcaatgattgctgcatccctatatgctgcatgtagagatacagaaacccctagaact
ctaaaggatatagccgattcagcaaatgttaaaagaaaagacattgcaaggtgctatcga
ttattgcatcacgagttagaattgaagatgcctgtagttgattcaattcaatgtattgca
cgaatttcaagtaagttagaaatttctgaaaaaactaaacgttacgcagttaaagtattg
aaagaagctcaagaacgaaaagaatctgcaggtaaagatcctatgggccttgcagcaact
gcattgtatctttcttgcgtaaaaaatggagtatctatcactcaacgtgaccttgcagaa
gctgcaggagtaactgaagtaacaatcagaaatagatacaaaggcttgaaagctgatcaa
gctccaaaaactgaagattcttctgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (63)   

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