KEGG   Nocardia cyriacigeorgica: NOCYR_3904
Entry
NOCYR_3904        CDS       T01756                                 
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 methyltransferase)
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
ncy  Nocardia cyriacigeorgica
Brite
KEGG Orthology (KO) [BR:ncy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncy03009]
    NOCYR_3904 (rsmD)
Enzymes [BR:ncy01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     NOCYR_3904 (rsmD)
Ribosome biogenesis [BR:ncy03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    NOCYR_3904 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 MTS Methyltransf_31 PrmA Methyltransf_25 RsmJ BpsA_C
Other DBs
NCBI-ProteinID: CCF64667
UniProt: H6R5X7
Position
complement(4295696..4296259)
AA seq 187 aa
MTRIVAGTAGGRRLRVPPAGTRPTSDRVREALFSAIDARLDLDGARVLDLYAGSGALGLE
ALSRGAARALLIESDRKAAAVVRGNIADLGLSGAELRVGAVGVVLAQSASAAFDLVFADP
PYDVPTEGVMADLTALAGNGWLAPEALVIVERSIRSPEIAWPAGYAPLKPRKYGETRIEL
AEFGASV
NT seq 564 nt   +upstreamnt  +downstreamnt
atgacgcgcatcgtcgccgggaccgcgggcgggcgccgcctgcgcgtcccgcccgcgggc
acccggcccacctcggaccgggtgcgcgaggcgctcttcagcgcgatcgacgcccggctg
gatctggacggtgcccgggtgctggacctctacgcggggtctggtgcgctcgggctggag
gcgctctcgcgcggcgcggcacgggccttgctgatcgaatccgatcgcaaggccgcggcg
gtggtgcgcggcaatatcgccgatctcggactgtccggggccgagttgcgggtgggggca
gtgggcgtggtgctcgcacagagtgcatccgccgccttcgatctggtcttcgccgacccg
ccgtacgacgtgcccaccgagggcgtgatggccgatctcacagctctggccggcaacggc
tggctcgcgccggaggcactggtgatcgtcgagcgatccattcgctcgcctgaaatcgcc
tggcccgcaggctatgcgccgctgaagccgcgcaagtacggggagaccagaatcgagctc
gccgagttcggtgctagcgtttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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