KEGG   Nitrospira defluvii: NIDE1920
Entry
NIDE1920          CDS       T01281                                 
Name
(GenBank) putative tRNA modifying enzyme, MiaB-like
  KO
K18707  threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
Organism
nde  Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:nde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nde03016]
    NIDE1920
Enzymes [BR:nde01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     NIDE1920
Transfer RNA biogenesis [BR:nde03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    NIDE1920
SSDB
Motif
Pfam: Radical_SAM UPF0004
Other DBs
NCBI-ProteinID: CBK41646
UniProt: D8PEI7
Position
complement(1816962..1818305)
AA seq 447 aa
MSTSMPRASLHTLGCRLSQSETSMLADTLARRGYQLVEFGKETDLLVLNTCSVTENAEKD
CRYAVRKTLRHSPHAFVAVTGCYAQTGATQLQKVPGIDLIVGTQFKMNLPDYLPAPAKLR
KQPEPELRHSRTIDREDFVLPGTAYSDSTRALLKIQDGCDFMCSFCLIPFARGRERSRTA
EDVLREARELAAHGYRELVLTGVNIGRYSYQGLGLVELLRELESVPDVTRIRISSIEPTT
VPAALLEHMAGSTKLCHYLHLPLQSGDNTILQAMNRRYAVREYEELVEQALALMPDLGLG
TDLMVGFPGEDEQAFANTVMTVERLPFSYFHVFSYSSRPGTAAARLEDQISPAVIRQRSK
ALSELSRTKALAFYQQQIGHTLPVLFEQGERDGFRTGTTANFTRVAVAADAVEAGSIHQV
TITGIMDGLAYGRPVATVSAPSHRPLL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgtccaccagcatgccacgcgcctcactccatacattgggctgccgtctcagccaatcc
gaaacctccatgttagccgataccctggcgcgccgggggtatcaactggtggagttcggc
aaggagacggacctgctcgtcttgaacacctgctcggtaacggagaatgccgaaaaagat
tgccgctatgccgtccgcaagactttgcgtcactcgccgcatgccttcgtcgcggtaacc
ggttgttatgcgcagaccggcgccacgcagctgcagaaggtacccggtatcgacctgatc
gtcggtacccagttcaagatgaatctccccgattatctcccggcgccggccaaactccgg
aaacagccggagccggaacttcgccatagccgtacgatcgatcgggaagacttcgtcctg
cccggcaccgcctattccgactcaacccgcgccctgctgaagattcaggacggctgcgat
ttcatgtgcagcttttgcctgattcccttcgcgcgcgggcgtgaacgcagccggaccgcc
gaggatgtgttgcgggaagctcgcgaactcgccgcccatggctatcgggaactcgtgctt
accggcgtcaacatcggccgatattcgtatcagggtctagggctggttgagctcctgcga
gaacttgagtcggttcccgatgtcacccggatcagaatttcctcgatcgaacccacgacc
gtcccagctgccttactggagcacatggccggctccacgaaactgtgccactacctgcac
ctccccctgcaaagcggcgacaataccatcttgcaggcaatgaaccggcggtatgccgtc
cgcgagtatgaggagctggtcgagcaggccttggcgctgatgccggacctcggattggga
accgacctcatggtcggatttcccggcgaagacgaacaggcattcgcgaatacggtcatg
accgtcgagcgactcccattctcctattttcatgtcttcagctattcgtcccgtccgggt
acggcagccgctcgcctggaagaccagatctcacccgccgtcatccggcagcgcagcaaa
gccctgtcggaactgtcacggacgaaagcgctggcgttttaccagcaacagatcggccac
accctgcccgtcttgttcgaacagggggagcgcgatggatttcggaccggcaccacagcc
aacttcacccgggtggcggtcgcggccgacgccgtcgaggccggctcgatccaccaggtc
accatcaccggcatcatggacgggctggcctatggccggccggtcgccacagtctcagcg
ccctcgcacaggccacttttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (66)   

Download RDF
DBGET integrated database retrieval system